Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3384 ATGGCTTCCTTCAATGTATTATTCTTCGTCCTTATTAGCATCCTCAACTTTTCATCAATTACTACAAAAGCAGAGGACACTCATTTTCTCTACCAGGTTTGCTCAAAATACAGATTCACTGCGATCAACACCACCTACCAAAACAACCTCAAGACCCTCCTCTCTTCCTTATCCTCCAAGGCCACCCACAACACCGAGTTCTACAACAACACCGTCACCGGAAAAACCCCCACCGACACAGTCTATGGACTATACATGTGCAGAGGAGACATACCCTCTGACCTATGCGGCGAGTGCGTGGGAAACGCAAGTCAAAGACTTTCAACAAACACAGAGTGTTCATTCTCCGTAGCGGCAGTTATATGGTACGACGAGTGCATGGTAAGGTACTCAAACACGTCGTTCTTCTCGCGCGTGACGGTGGCGCCTGGTTACCCTGGCTACGCGTTGCCCAGCCCCACCAACATGACGGACCAACAAAGCTTCAACCGTTTATTGTATCGAACCTTGAATCAAACTGCGGACGAAGCAGCCAACGCGCCCATGGGTGCAAAGAAGTTCGCTACAAAGGAAGCTGCGATATCCATATTCCAGAATCTTTACTGTCTTGCTCAGTGTACGCCGGATCTATCGCCGGAAGATTGTAGAAGCTGTTTGGATGGTTTGATCAATTCGAACCTTCCTGAGTGCTGTGCCGGAAAGCAAGGAGGGAGGGTTCTGTACCCTAATTGCAATATTCGGTTTGAGATTTACCCTTTCTATCGATCACTTGAATCTGCACCGTCCCCAGCACCATCATCAAATTCCAGAGACAAAAGAAGTCGATCACGAACAATTATCTTAATCGTTGTACCCATTGCTATTGTGGCATTGCTTTTCACTTTGTGCTGCTATATGCTAAGAAGAAGACAAAAAAAGAATTCTAAGACTATTCTTAGAGAAAACTTTGGTCGTGAAAGTGCCACTTTAGAAGGGCTGCAATTCGATTTCTCTATAATTGAAGCAGCCACGAACAACTTTTCTCACCAGAACATGATTGGCAAAGGAGGATTTGGAGAAGTTTACAAGGGTACTCTTCCTGATGGCCGACATGTAGCTATAAAAAGACTCTCTACAAGTTCTAAACAAGGTGTGGTTGAGTTCAAGAATGAAATTTTGCTGATAGCGAAGCTTCAACACAGGAATCTAGTATCTTTTATGGGCTTTTGTATAGAAGAACAAGAGAAAATACTACTTTACGAATACGTGCCAAATGGAAGTCTTGATTACTTTTTATTTGATGGTGGTCAACAACAAAATTTAAGCTGGGATCAACGTTATAAAATTATTGGAGGAACTGTTCTTGGAATTCTTTATTTACATGAATATTCTCGACTTAAAGTTATACATCGTGATTTAAAGCCGAGTAATATTTTACTGGATGAAAATATGAATCCAAAAATTTCAGATTTTGGTATGGCTAGAATAGTTGACATTAATCAAAACAGAGGAAAAACAAATAGAATTGTTGGTACATATGGCTATATGTCTCCAGAATACGCAATGCTTGGACAATTTTCAGAAAAATCAGATGTTTTTAGTTTTGGAGTCGTGATCCTAGAAATCGTTACGGGACAAAAGATAGTAAATTCTTATACTTCAAATCGTGTTGGAGAAAGTCTTTTAAATTATGTTTGGAAACAATGGAGGGATGGAACACCATTAAGCATATTGGATCCAAAAATAAAGGAAGATTATAACCAGGTGGAAGTTATAAAATGCATTCAAATTGGTTTATTATGCGTTCAAGAAAACCCAAATTCTAGACCTACAATGGGGACAATAGTTTCATATCTTAATAATCATTCTCTTGATTTGCCATCTCCACAAGAACCAGCATTTTTCTTGCATGATAGTGGTATTATGGATCCAAAAACAGTTGCACAAGAATCAAGTTCCAGTCAATCTGGCAAAAGTTCAACAACCTTCTCTATAAATGAAATGTCAATAAGTAAATTTCATCCTCGATAA 2010 0.3975 MASFNVLFFVLISILNFSSITTKAEDTHFLYQVCSKYRFTAINTTYQNNLKTLLSSLSSKATHNTEFYNNTVTGKTPTDTVYGLYMCRGDIPSDLCGECVGNASQRLSTNTECSFSVAAVIWYDECMVRYSNTSFFSRVTVAPGYPGYALPSPTNMTDQQSFNRLLYRTLNQTADEAANAPMGAKKFATKEAAISIFQNLYCLAQCTPDLSPEDCRSCLDGLINSNLPECCAGKQGGRVLYPNCNIRFEIYPFYRSLESAPSPAPSSNSRDKRSRSRTIILIVVPIAIVALLFTLCCYMLRRRQKKNSKTILRENFGRESATLEGLQFDFSIIEAATNNFSHQNMIGKGGFGEVYKGTLPDGRHVAIKRLSTSSKQGVVEFKNEILLIAKLQHRNLVSFMGFCIEEQEKILLYEYVPNGSLDYFLFDGGQQQNLSWDQRYKIIGGTVLGILYLHEYSRLKVIHRDLKPSNILLDENMNPKISDFGMARIVDINQNRGKTNRIVGTYGYMSPEYAMLGQFSEKSDVFSFGVVILEIVTGQKIVNSYTSNRVGESLLNYVWKQWRDGTPLSILDPKIKEDYNQVEVIKCIQIGLLCVQENPNSRPTMGTIVSYLNNHSLDLPSPQEPAFFLHDSGIMDPKTVAQESSSSQSGKSSTTFSINEMSISKFHPR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3384 669 Gene3D Phosphorylase Kinase; domain 1 299 415 - -
Ahy19g3384 669 ProSiteProfiles Gnk2-homologous domain profile. 27 135 IPR002902 -
Ahy19g3384 669 Gene3D - 25 135 IPR038408 -
Ahy19g3384 669 Gene3D - 148 253 IPR038408 -
Ahy19g3384 669 CDD STKc_IRAK 346 614 - -
Ahy19g3384 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 268 637 - -
Ahy19g3384 669 Gene3D Transferase(Phosphotransferase) domain 1 416 620 - -
Ahy19g3384 669 ProSiteProfiles Gnk2-homologous domain profile. 144 253 IPR002902 -
Ahy19g3384 669 ProSiteProfiles Protein kinase domain profile. 340 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3384 669 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 268 637 - -
Ahy19g3384 669 SMART serkin_6 340 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3384 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Ahy19g3384 669 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 18 258 - -
Ahy19g3384 669 Pfam Protein kinase domain 342 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3384 669 SUPERFAMILY Protein kinase-like (PK-like) 324 646 IPR011009 -
Ahy19g3384 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 258 - -
Ahy19g3384 669 Pfam Salt stress response/antifungal 38 132 IPR002902 -
Ahy19g3384 669 Pfam Salt stress response/antifungal 155 250 IPR002902 -
Ahy19g3384 669 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3384 Ahy-Chr19 156661171 156665340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3384 11 669 Receptor kinase-like Gene Family AT4G05200 44.772 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy19g3384 Pkinase 5.70E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3384 - - vun:114191422 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3384 19 156661171 156665340 Ahy9g2251 9 111510720 111514809 hybridization