Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3383 ATGGCTTCCTTCAATGTATTATTCTTCGTCCTTATTAGCATCCTCAACTTTTCATCAATTACTACAAAAGCAGAGGACACTCATTTTCTCTACCAGGTTTGCTCAAAATACAGATTCACTCCGATCAACACCACCTACCAAAACAACCTCAGGACCCTCCTCTCTTCCTTATCCTCCAAGGCCACCCACAACACCGAATTCTACAACAACACCGTCACCGGAAAAACCCCCGCCGACACAGTCTATGGACTATACATGTGCAGAGGAGACATACCCTCTGAGCTATGCGGCGAGTGCGTGGGAAACGCAAGTCAAAGACTTTCAACAAACACAGAGTGTTCACTCTCCATAGCGGCAGTTATGTGGTACGACGAGTGCATGGTAAGGTACTCAAACACGTCGTTCTTCTCGCGCGTGACGGTGGCGCCTGGCTACCCTGGCTACGCGTTGTCCAGCCCCACCAACATGACAGACCAACAAAGCTTCAACCGTTTATTGTATCGAACCTTGAATCAAACTGCGGACGAAGCGGCCAACGCGCCCATCGGTGCAAAGAAGTTCGCTACAAAGGAAGCTGCGATATCCATATTCCAGAATCTTTATTGTCTTGCTCAGTGCACGCCGGATCTGTCGCCGGAAGATTGTAGAAGCTGTTTGGATGGTTTGATCAATTCGAACCTTCCTGAGTGCTGTGCAGGAAAGCAAGGAGGGAGGATTCTGTACCCTAATTGCAATATTCGGTTTGAGATTTACCCTTTCTATCGATCACTTCAACCTGCACCGTCCCCAGCACCATCATCAAATTCCAGAGTTGGTGGTGAAGGTGCCATTTTAGAAGGGTTGCAATTCGATTTCTCTATAATTGAAGCATCCACGAACAACTTTTCTCACCAGAACATGATTGGCAAAGGAGGATTTGGAGAAGTTTACAAGGGTACTCTTCCTGATGGCCGACATGTAGCTATAAAAAGACTCTCTACAAGTTCTAAACAAGGTGTGGTTGAGTTCAAGAATGAAATTTTGCTGATAGCGAAGCTTCAACACAGGAATCTAGTATCTTTTATGGGCTTTTGTATAGAAGAACAAGAGAAAATACTACTTTACGAATACGTGCCAAATGGAAGTCTTGATTGCTTTTTATTTGATGGTGGTCAACAACAAAAGTTAAGCTGGGATCAACGTTATAAAATTATCGGAGGAACTGCTCTTGGAATTCTTTATTTACATGAATATTCACGACTTAAAGTTATACATCGTGATTTAAAACCGAGTAATATTTTACTGGATAAAAATATGAATGCAAAAATTTCAGATTTTGGTATGGCTAGAATAGTCGACATTGATCAAGACAGAGGAGAAACAAATAGAATTGTTGGTACATATGGTTATATGTCTCCAGAATATGCAATGCTTGGACAATTTTCAGAAAAATCAGACGTTTTTAGTTTTGGAGTAATAATTCTAGAAATTGTTACCGGACAAAAGAATGCAAATTCTTATACTTCAAATCGTGTTGCAGAAAGTCTTTTAAATTATGTTTGGAAACAATGGAGGAATGGAACACCATTAAGCATATTGGATCCAAAAATAAAGGAAGATTATAACCAGGTGGAAGTTATAAAATGCATTCAAATTGGTTTATTATGCGTTCAAGAAAACCCAAATTCTAGACCTACAATGGGGACAATAGTTTCATATCTTAATAATCATTCTCTTGATTTGCCATCTCCACAAGAACCAGCATTTTTCTTGCATGGTGGTTTCATGGATCCAAAAACAGTTGCACAAGAATCAAGTTCTAGTCATCAATCTGGCAAAAGTTCAACAACCTTCTCTATAAATGAAATGTCAATAAGTAAATTTCATCCTCGATAA 1875 0.4027 MASFNVLFFVLISILNFSSITTKAEDTHFLYQVCSKYRFTPINTTYQNNLRTLLSSLSSKATHNTEFYNNTVTGKTPADTVYGLYMCRGDIPSELCGECVGNASQRLSTNTECSLSIAAVMWYDECMVRYSNTSFFSRVTVAPGYPGYALSSPTNMTDQQSFNRLLYRTLNQTADEAANAPIGAKKFATKEAAISIFQNLYCLAQCTPDLSPEDCRSCLDGLINSNLPECCAGKQGGRILYPNCNIRFEIYPFYRSLQPAPSPAPSSNSRVGGEGAILEGLQFDFSIIEASTNNFSHQNMIGKGGFGEVYKGTLPDGRHVAIKRLSTSSKQGVVEFKNEILLIAKLQHRNLVSFMGFCIEEQEKILLYEYVPNGSLDCFLFDGGQQQKLSWDQRYKIIGGTALGILYLHEYSRLKVIHRDLKPSNILLDKNMNAKISDFGMARIVDIDQDRGETNRIVGTYGYMSPEYAMLGQFSEKSDVFSFGVIILEIVTGQKNANSYTSNRVAESLLNYVWKQWRNGTPLSILDPKIKEDYNQVEVIKCIQIGLLCVQENPNSRPTMGTIVSYLNNHSLDLPSPQEPAFFLHGGFMDPKTVAQESSSSHQSGKSSTTFSINEMSISKFHPR* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3383 624 ProSiteProfiles Protein kinase domain profile. 295 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3383 624 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 272 591 - -
Ahy19g3383 624 Gene3D Phosphorylase Kinase; domain 1 272 370 - -
Ahy19g3383 624 ProSiteProfiles Gnk2-homologous domain profile. 144 253 IPR002902 -
Ahy19g3383 624 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Ahy19g3383 624 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 272 591 - -
Ahy19g3383 624 Pfam Salt stress response/antifungal 38 132 IPR002902 -
Ahy19g3383 624 Pfam Salt stress response/antifungal 154 250 IPR002902 -
Ahy19g3383 624 Pfam Protein kinase domain 297 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3383 624 Gene3D Transferase(Phosphotransferase) domain 1 371 575 - -
Ahy19g3383 624 SMART serkin_6 295 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3383 624 SUPERFAMILY Protein kinase-like (PK-like) 280 590 IPR011009 -
Ahy19g3383 624 CDD STKc_IRAK 301 569 - -
Ahy19g3383 624 ProSiteProfiles Gnk2-homologous domain profile. 27 135 IPR002902 -
Ahy19g3383 624 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 18 258 - -
Ahy19g3383 624 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 258 - -
Ahy19g3383 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Ahy19g3383 624 Gene3D - 25 135 IPR038408 -
Ahy19g3383 624 Gene3D - 147 253 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3383 Ahy-Chr19 156652155 156656201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3383 11 624 Receptor kinase-like Gene Family AT4G05200 40.916 3.22e-177 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy19g3383 Pkinase 5.30E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3383 - - vun:114191422 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3383 19 156652155 156656201 Ahy9g2252 9 111524690 111528707 hybridization