LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy19g3381	ATGTCTTTCCTCAAACCCATATTACTCCAAATTTGCCTTTTCTTATTCTTCAAAGTTTCCATGGACGAAGCAAATGACAATAACCAACTTGAGTACCTCAGTCACAGTTGCTCAACCAACAAAACCTTCCCTCCCAACACCACCTACGAATCCAACCTACACACCCTCCTCACCTCTTTCTCTTCCGTTGCCGCCACTGCCGAGTTCTACAACACCACTTCCTCCGGCGGAGATGCCACCGGCGAAACAATCTATGGCATGTTCATGTGCAGGGGCGACATCAAGAGCCAGAAATGCCAAAAATGCATTGAAATGGCAACCCAGAAAATAGCCTTAAGTTGTCCAAACTCCAAAGAAGCCATAATTTGGTACCATGAGTGCATGGTTCGTTACTCCAACCGCTCTTTCTTCTCAACCGTGGACGAATGGCCGCGGCCTAAGTACATCAGTCATCACGAAACGTCGAATATAACCACGGAAGGGAGCTATGGATGGTTGTTAGCAACCACGTTGAACGATGCCATTGCTGAGGCTGCGAAATCTGCCAATGGCAATAAGAAATTTGCAACAAAACATGTGAGCTTGGGAGGGTCTCAGAATGTGTATACACTTGTTCAGTGCACACCTGATTTGTCGAGTCAAGATTGCAGCAAGTGTTTGAATGATGTGATGAAAGATATTCCTATCTGCTGTTTGGGAACAGATGGTGGAATGGTTTTGTATCCAAGCTGCAATTTGATGTTTGGCTTACATCGATTCTACTCCGACGCTAATCTTCCTATTAATTGGTACCAACTACCCAAACCTTTTGTTGGTAAACCACTTTCAGGAGAACCAAGTGGCAGAAGAAGATTAAAGATTATCATAGCGTCTACTGTTCCTATTGTTGCTTTCTTGATGCTTTATTTCTTTGGCTATCATTTCCGGCGGATAAATGCTCTGCGGCGTTATAAGGCTATCCTTAAAGAAAATTTTGGAAACGAAAGTACTACTTTGGAGTCATTGCAATTTGACTTAGTTACGATTGAAGAAGCAACAAACAATTTTTCTTGTTCAAACTTGATAGGTAAAGGTGGATTCGGAGAAGTTTACAAGGGTATTCTTTCTGATGGACGAGAAATAGCGGTAAAAAGATTGTCAATAACTTCCGAGCAAGGCATTGCAGAATTTAAGAATGAAGTTTTGCTGATAGCTAAACTTCAACACAGAAATCTTGTTGCATTATTGGGATTTTGCTTACAAGAAGGAGAGAAAATACTTATTTATGAATTTGTTCCTAACAAGAGCCTAGACTACTTTTTATTCGGTTCTGAACTGCATAGGCTATTAAGTTGGTGTGAGAGATTTAAAATTATAGGCGGAATTGCTAGAGCAATTCTTTATTTACATGAGTATTCTCGCCTCAAAATTATACACCGTGATATCAAACCTAGTAATATTTTATTAGATGCCAACATGAATCCTAAAATTTCAGATTTTGGCATGGCGAGAATGGTTGCTATTGATCAAGATCAAGGACGAACACGTAGAATTGTCGGAACATATGGTTATATGTCTCCAGAATATGCTATGTTAGGAAAATATTCGGAAAAATCTGATATCTTCAGTTTTGGAGTTATGATTTTGGAAATTGTTAGTGGCAAAAAAAATTCAAGTTCTTATGACTCTTACTACAACGATGGTCTCTTGAGTCATGCTTGGAAGCAATGGAGAGATGGGACACCATTTGAAATACTGGACCCAAATCTACATGAATCATGTTCTCAAATGGAAGTGATTAGATGCATCCAAGTTGGTTTACTATGTGTTCAAGAAAATCCTAATGATAGGCCACAAATGGCAGAAGTAGTTTCATATCTAAGTAACCTCTGCATTGAGTTGCCATTTCCTCGCGAGCCTGCTTTTTTTGTACATGGTAGAATGAATCCAAATATGGTCGCAGTAGAAGTTGATTTAGGACACCTAAGCAATAGTTCCACTCAACATTCACTCAACGAAATGTCTATTAGTATCTCTGTTCCACGATAG	2028	0.3969	MSFLKPILLQICLFLFFKVSMDEANDNNQLEYLSHSCSTNKTFPPNTTYESNLHTLLTSFSSVAATAEFYNTTSSGGDATGETIYGMFMCRGDIKSQKCQKCIEMATQKIALSCPNSKEAIIWYHECMVRYSNRSFFSTVDEWPRPKYISHHETSNITTEGSYGWLLATTLNDAIAEAAKSANGNKKFATKHVSLGGSQNVYTLVQCTPDLSSQDCSKCLNDVMKDIPICCLGTDGGMVLYPSCNLMFGLHRFYSDANLPINWYQLPKPFVGKPLSGEPSGRRRLKIIIASTVPIVAFLMLYFFGYHFRRINALRRYKAILKENFGNESTTLESLQFDLVTIEEATNNFSCSNLIGKGGFGEVYKGILSDGREIAVKRLSITSEQGIAEFKNEVLLIAKLQHRNLVALLGFCLQEGEKILIYEFVPNKSLDYFLFGSELHRLLSWCERFKIIGGIARAILYLHEYSRLKIIHRDIKPSNILLDANMNPKISDFGMARMVAIDQDQGRTRRIVGTYGYMSPEYAMLGKYSEKSDIFSFGVMILEIVSGKKNSSSYDSYYNDGLLSHAWKQWRDGTPFEILDPNLHESCSQMEVIRCIQVGLLCVQENPNDRPQMAEVVSYLSNLCIELPFPREPAFFVHGRMNPNMVAVEVDLGHLSNSSTQHSLNEMSISISVPR*	676

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy19g3381	675	Pfam	Salt stress response/antifungal	155	248	IPR002902	-
	Ahy19g3381	675	Pfam	Salt stress response/antifungal	37	133	IPR002902	-
	Ahy19g3381	675	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	470	482	IPR008271	GO:0004672\|GO:0006468
	Ahy19g3381	675	Gene3D	-	29	136	IPR038408	-
	Ahy19g3381	675	Gene3D	-	147	253	IPR038408	-
	Ahy19g3381	675	Gene3D	Phosphorylase Kinase; domain 1	313	424	-	-
	Ahy19g3381	675	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	21	264	-	-
	Ahy19g3381	675	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	278	660	-	-
	Ahy19g3381	675	ProSitePatterns	Protein kinases ATP-binding region signature.	355	377	IPR017441	GO:0005524
	Ahy19g3381	675	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	21	264	-	-
	Ahy19g3381	675	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	278	660	-	-
	Ahy19g3381	675	ProSiteProfiles	Gnk2-homologous domain profile.	31	136	IPR002902	-
	Ahy19g3381	675	Pfam	Protein kinase domain	352	617	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy19g3381	675	Gene3D	Transferase(Phosphotransferase) domain 1	425	627	-	-
	Ahy19g3381	675	SMART	serkin_6	349	620	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy19g3381	675	ProSiteProfiles	Gnk2-homologous domain profile.	145	253	IPR002902	-
	Ahy19g3381	675	ProSiteProfiles	Protein kinase domain profile.	349	635	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy19g3381	675	CDD	STKc_IRAK	355	623	-	-
	Ahy19g3381	675	SUPERFAMILY	Protein kinase-like (PK-like)	332	642	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy19g3381	Ahy-Chr19	156637757	156643544	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy19g3381	8	675	Receptor kinase-like Gene Family	AT4G05200	43.446	0.0	541

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Ahy19g3381		Pkinase	3.10E-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy19g3381	-		-	aip:110262495	1115.52