Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3378 ATGGGTTGGAATTGGATGAGGATCACCTTCAACCTTGTCCCAGTATCACTCTCCCTGCTGCTGCTCCTCAATTTTGCAACCACCGCTAAAGCGCAAGGTCCCACTTATCTTTACAATATTTGTTCAGACAACAAGACCACTCCCAACAGCCTCTTCAAAAAGGATCTCAACACCCTCTTCTCATCTCTCTCTTCCAACGCCACCGCCAACGCTGAATTCTTCAACACCACCGTCCCTGCCACAAACTCCAACGACACGGCCTACGGTCTCTTCATGTGCAGGGGCGACTTATCCTCTTGCGGTCAGTGCGTGGTCAACGCCACGCAGAAGCTTTCATCCGATGCAAATTGTTCCTTATCAAAACGAGCCATCATTTGGTACGACGAGTGCATGGTTTGGTATTCCAATAACCGCTCTATCTTGTCCACAATGTTCACGAGGCCCGGCGTTTACCTCTCCAACACGGGGAATGTCTCCAACCAGGAAAGCTTCATGAAGTTGTTGTTCAGAACCATGAATGAAACGGCGAAAGAAGCAGCCAAGTCCCCTGTTCTTGAAAAGAAGTACGCTACAAGGCAAGCCAACATATCTGGTTTTCAGAACCTTTATTGTATGGCTCAGTGTACCGATAACCTCACACCACGAGACTGTGCCAGCTGTCTAACTGAAGCCATAACTGAATTAACGCCCTGCTGTGGAGGAAAGCAGGGAGGGAGGGTTCTATTCCCCAGCTGTTTCGTTCGGTATGAGTTGTACCCTTTCTATAATGCTTTGGCTCCTTCGCCTTCTCCGTCGGCAGGGATAGTTCCTCCTCCACCTGCAACTAATTCATCTAATTCCGGAGGAAGTAGTGGACTATCATCCGGGACTATTGTTGCAATTGTGGTTCCAATTGCAGTGGCTGTGCTACTGTTTGTTGCGGGCGTTTGTTTCTTAATTAGAAGAAGAGCAAGGAAGAAGCATGACTCTGCACAAGATCCACAAACTGTGACCGAGATCTCTAGCATTGATTCGTTGAGATTCGATTTGAGTACAATTGAAGCAGCCACAAAGAAATTCTCTCAAGATAACAAGCTTGGAGAAGGTGGATTTGGTGAGGTTTACAAGGGCTTGCTTCCAAGTGGACAAGAAGTAGCTGTTAAGAGGCTCTCTAAAGGATCTGTACAAGGTGGAGAAGAATTCAAGAATGAAGTAGAGCTGGTTGCCAAGCTTCAACATAGATATCTAGTCAGGCTTTTGGGATTTTGCTTGCAAGGAGAAGAGAAGATACTTGTATATGAATATGTACCCAACAAAAGCTTGGACTACATTCTTTTCGATCCTGAGAAACAAGGATTGTTGGATTGGACAAGACGATACAAGATTATTGGAGGCATTGCTCGAGGAATTCAATATCTCCATGAAGATTCTAGACTTAAAATCATACATCGTGATCTTAAACCTAGCAACATATTGTTGGATGAAGATATGAATCCAAAAATTGCAGATTTTGGTATGGCAAGGTTATTTGCTGTTGATCAAACTCAAGGAAATACTAGCAGGATTGTTGGGACATATGGCTACATGTCCCCGGAATATGCGATGCGCGGAGAGTTCTCGGTTAAGTCTGATGTATACAGTTTTGGAGTCCTTGTTTTGGAGATTATAAGTGGCAAGAAGATAAGCTCTTTCTATGAAACAGATGCTGATGACCTAGTGAGCTATGCTTGGAAACTTTGGAAGGAAGGGACACCCTTGGAATTGATGGATCCCACGTTGAGAAAATCTTATACTCCAAATGAAGTTATGAGATGCATCCATATTGGTTTACTCTGTGTCCAAGAAGATCCAGCAGATAGACCTACAATGGCAACAATAATGCTTATGCTGGATAGTTATTCTGTTACTCTACCAGTACCTAATCAGCCAGCATTTGTCGTGCACAGCGGAACTGATTCAAACATGCTGCAATTCAGTGAACCTACAACCAATGTATCAGTGCAAACTTCTGTCAATGAGATGTCGGTTAGCGAAATGGATCCTAGATAA 2028 0.4423 MGWNWMRITFNLVPVSLSLLLLLNFATTAKAQGPTYLYNICSDNKTTPNSLFKKDLNTLFSSLSSNATANAEFFNTTVPATNSNDTAYGLFMCRGDLSSCGQCVVNATQKLSSDANCSLSKRAIIWYDECMVWYSNNRSILSTMFTRPGVYLSNTGNVSNQESFMKLLFRTMNETAKEAAKSPVLEKKYATRQANISGFQNLYCMAQCTDNLTPRDCASCLTEAITELTPCCGGKQGGRVLFPSCFVRYELYPFYNALAPSPSPSAGIVPPPPATNSSNSGGSSGLSSGTIVAIVVPIAVAVLLFVAGVCFLIRRRARKKHDSAQDPQTVTEISSIDSLRFDLSTIEAATKKFSQDNKLGEGGFGEVYKGLLPSGQEVAVKRLSKGSVQGGEEFKNEVELVAKLQHRYLVRLLGFCLQGEEKILVYEYVPNKSLDYILFDPEKQGLLDWTRRYKIIGGIARGIQYLHEDSRLKIIHRDLKPSNILLDEDMNPKIADFGMARLFAVDQTQGNTSRIVGTYGYMSPEYAMRGEFSVKSDVYSFGVLVLEIISGKKISSFYETDADDLVSYAWKLWKEGTPLELMDPTLRKSYTPNEVMRCIHIGLLCVQEDPADRPTMATIMLMLDSYSVTLPVPNQPAFVVHSGTDSNMLQFSEPTTNVSVQTSVNEMSVSEMDPR* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3378 675 Gene3D - 149 254 IPR038408 -
Ahy19g3378 675 Gene3D - 33 138 IPR038408 -
Ahy19g3378 675 ProSiteProfiles Gnk2-homologous domain profile. 146 254 IPR002902 -
Ahy19g3378 675 SUPERFAMILY Protein kinase-like (PK-like) 338 661 IPR011009 -
Ahy19g3378 675 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Ahy19g3378 675 Gene3D Phosphorylase Kinase; domain 1 314 428 - -
Ahy19g3378 675 Gene3D Transferase(Phosphotransferase) domain 1 429 631 - -
Ahy19g3378 675 SMART serkin_6 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3378 675 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 673 - -
Ahy19g3378 675 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 19 673 - -
Ahy19g3378 675 ProSiteProfiles Protein kinase domain profile. 353 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3378 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Ahy19g3378 675 Pfam Protein kinase domain 354 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3378 675 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Ahy19g3378 675 CDD STKc_IRAK 359 624 - -
Ahy19g3378 675 Pfam Salt stress response/antifungal 41 136 IPR002902 -
Ahy19g3378 675 Pfam Salt stress response/antifungal 156 252 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3378 Ahy-Chr19 156609492 156614342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3378 16 675 Receptor kinase-like Gene Family AT4G05200 52.889 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy19g3378 Pkinase 5.40E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3378 - - aip:107616499 1272.3