Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3372 ATGGCTGCCATGGCCGTAGCTTCTGAAAACTTGTTCTTACTTCTTTCTGTCCTTGTCATCTTCACGTCTCTAGCCACCTCTCAACCAGATTTTGTTCACTATGTCTGTAAGGACAACAATGGTAACTACACAGCTAACAGTACCTACAGTTCAAACCTCAATACCCTCTTGTCCAACCTCTCTTCTATCATAGGAACTACCAATGACTACCGTTTCTACAATCTCTCCAATGGACAAAACACAGACAAAGTTAACCTGATTTGGATGTGCAGAGGAGATGTTACAAAAGAAGATTGCCTTAGCTGTTTGAACGATTCAAGAATCCTTCTGCCAAAGGTTTGTCCAAACCAGAAGGAGGCAACAGGGTGGTATGATTACTGCATGTTGCGCTACTCGAACCGGTCCATATTTGGGATCATGGACTCCAATCGGTGGGAGATACATAACAAAAAGAATGTAAATGATGCGAATGAGTTCAACCAAGTTGCTGCAGACTTGATGCAAAGCCTAAGAAGCAAAGCTGCTGCAATTTCTGGTGAATCTCTGATCAAGTTTTCTGCAGGAGAAGCCAAAGTAGGGGCAGGATTTCAAACCGTGTATGCTCATGTAAAGTGCACTAATGATTTGTCAGAGCTAGAATGCAATGAATGCTTGACTGAAGGAATCTCCCACATCCCAACTTGCTGCAATGGAAAGATACGTGCAAGAATTTTTACCCCCAGTTGTAATCTTAGATATGACACACAGCTTTACTTTGATTCTCTAAGCGTTCTGCCACCTCAACCATCTCTTTCTCCTGCTCCATCATCCCCTACTGCCACTGCTACGCCCAAACAAGGAAAGAACAACTCATCATCAGCAACTGTGACTGCCATAGTTGTGCCTGTCGTCTCCCTTGTTATTGTGCTGTTCATCACCTTTGTCTGCATCTACTTCAAAAGGAAGAAGAAGAAGCCAACCAAGTATTCTGAAAGTCAAGGTGCATCAGAAGCTGACTATGAAATTGAACCTATTGAAACATTACAATTCCACTTTCAAACCATCATGGACGCTACAAATAACTTCTCAATTGAAAATAAGCTTGGAGAAGGTGGATTTGGACTTGTCTATAAGGGTAGGCTACCAAATGGCAAAGAGGTTGCGGTCAAAAGATTGTCTAGAAATTCTGACCAAGGAGATATAGAATTTAAGAATGAGCTGCTATTGGTAGCAAAACTTCAACATCGAAATTTAGTTAGGCTACTTGGCTTTTGTTTGGAAACAGGAGAGAGGATACTGGTCTACGAGTTTCTTCCCAATAAAAGCCTTGATTACTTCATATTTGGTAACTTAGAACTTCTTCTTGGCTACTCAATGAGCAATAAAATTATAGTCGGAATCGCTCAAGGTCTTCTTTATCTACACGAGGATTCTCAACTGCGTATTATCCATCGTGATCTAAAAGCAAGTAACATACTTTTAGATGAGCAAATGAACCCAAAGATCGCAGACTTTGGCATGGCGAGATTGTTTGTTGAGAATCAAACTCAAGAAAATACAGTTAGAATAGTTGGAACCTATGGATATATGGCACCAGAATATGCATTGCATGGACAATTTTCAATAAAGTCAGATGTTTTTAGTTTCGGAGTACTACTTCTTGAGATAGTGAGCGGACACAAAAATGGAGACATCCATAACGGCGAGTATGTAGAACATCTAATAAGCTTTACATGGAGAAAATGGAGGGAAGGTTCTGACTCAGCCTCTGATATTGTAGATCCCACATTGAATAGTAGATTCGGATATCAAATAATGAGATGCATCCATATCGGATTGTTATGCGTTCAAGAGAATTTAGCTGATAGACCAACCATGGCTACGGTTGTAGTGATGCTTAATAGCGACTCCCTCGCTCTTCCAATGCCTTCAAGAGCAGCATATGTTATTACGAATAATTCCGGAGATTTATCAAATAGCAGCAGATTAGGTGAATCAAGAAACTATGCTCTGCAAGCAGCATCAGGCGCAAATGAGGCTTCGTTTACTGAGCTCCATCCTCGTTAG 2046 0.4091 MAAMAVASENLFLLLSVLVIFTSLATSQPDFVHYVCKDNNGNYTANSTYSSNLNTLLSNLSSIIGTTNDYRFYNLSNGQNTDKVNLIWMCRGDVTKEDCLSCLNDSRILLPKVCPNQKEATGWYDYCMLRYSNRSIFGIMDSNRWEIHNKKNVNDANEFNQVAADLMQSLRSKAAAISGESLIKFSAGEAKVGAGFQTVYAHVKCTNDLSELECNECLTEGISHIPTCCNGKIRARIFTPSCNLRYDTQLYFDSLSVLPPQPSLSPAPSSPTATATPKQGKNNSSSATVTAIVVPVVSLVIVLFITFVCIYFKRKKKKPTKYSESQGASEADYEIEPIETLQFHFQTIMDATNNFSIENKLGEGGFGLVYKGRLPNGKEVAVKRLSRNSDQGDIEFKNELLLVAKLQHRNLVRLLGFCLETGERILVYEFLPNKSLDYFIFGNLELLLGYSMSNKIIVGIAQGLLYLHEDSQLRIIHRDLKASNILLDEQMNPKIADFGMARLFVENQTQENTVRIVGTYGYMAPEYALHGQFSIKSDVFSFGVLLLEIVSGHKNGDIHNGEYVEHLISFTWRKWREGSDSASDIVDPTLNSRFGYQIMRCIHIGLLCVQENLADRPTMATVVVMLNSDSLALPMPSRAAYVITNNSGDLSNSSRLGESRNYALQAASGANEASFTELHPR* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3372 681 Pfam Protein tyrosine and serine/threonine kinase 356 623 IPR001245 GO:0004672|GO:0006468
Ahy19g3372 681 ProSiteProfiles Protein kinase domain profile. 355 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3372 681 Gene3D Phosphorylase Kinase; domain 1 315 430 - -
Ahy19g3372 681 MobiDBLite consensus disorder prediction 262 284 - -
Ahy19g3372 681 SMART serkin_6 355 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3372 681 ProSiteProfiles Gnk2-homologous domain profile. 141 251 IPR002902 -
Ahy19g3372 681 ProSiteProfiles Gnk2-homologous domain profile. 31 136 IPR002902 -
Ahy19g3372 681 Gene3D - 29 135 IPR038408 -
Ahy19g3372 681 Gene3D - 142 250 IPR038408 -
Ahy19g3372 681 MobiDBLite consensus disorder prediction 268 284 - -
Ahy19g3372 681 SUPERFAMILY Protein kinase-like (PK-like) 343 643 IPR011009 -
Ahy19g3372 681 CDD STKc_IRAK 361 627 - -
Ahy19g3372 681 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 664 - -
Ahy19g3372 681 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 664 - -
Ahy19g3372 681 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Ahy19g3372 681 Pfam Salt stress response/antifungal 36 133 IPR002902 -
Ahy19g3372 681 Pfam Salt stress response/antifungal 151 248 IPR002902 -
Ahy19g3372 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Ahy19g3372 681 Gene3D Transferase(Phosphotransferase) domain 1 431 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3372 Ahy-Chr19 156578985 156581874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3372 12 681 Receptor kinase-like Gene Family AT4G21410 46.948 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy19g3372 PK_Tyr_Ser-Thr 1.40E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3372 - - gmx:100782266 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3372 19 156578985 156581874 Ahy9g2267 9 111630395 111633287 hybridization