Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3368 ATGATTGCTGTGAAAAGGCTGTCAAGGGACTCAGGACAAGGAGCTACGGAATTTAAGACTGAAGTGCTTTTATTGGTCAAGCTTCAACATCGAAATTTAGTTAAACTTCTTGGTTTTTGTTTGGAAGGAAGTGAAAGATTACTTGTTTATGAATTCGTTCCTAACAAAAGTCTTGATTACTTCATATTTGATCCTATCAAGAGAAATCAACTGAATTGGGCAAGCCGATATAAAATCATTGAAGGTGTTGCTCGAGCTCTTCTTTATCTTCACGAAGATTCTAGGTTGCGCATTATACATCGGGATCTTAAAGCAAGTAATATCCTCTTAGACGACAACATGAATCCTAAGATAGCAGATTTTGGATTGGCAAGATTGTTTGACAGAGATCAAACTCAAGGAAATACTAATCAAATTGCCGGAACCTATGGATATATGGCACCCGAATATGCAATGTATGGACAATTTTCAACGAAGTCAGATGTATTTAGCTTTGGTGTAATAGTGCTTGAAATTTTGAGTGGCAAAAGACACATTGGGAATGGCAATGGGGAGAGTGAAGAACAGCTAATAAGCTTTGTATGGAGAAATTGGAGGGAAGGAACAGCTATAAATATTGCAGATCCATCATTAAGCAACATTTCACCAAATGAAATTATGAGATGCGTCCACATTGGTTTACTTTGTGTTCAAGAAAATTTAGCAGATAGGCCAAACATGGGTTCTATTGTATTAATGCTTAATAGTTATTCTGTGACTCTGCCCACACCTTCAGAACCTGCATTTTTTGTGGGGAGTAGAACTAGAAGCCGTCCATTATCAGATATACAATCAGGGGGGAATAATTCATCAACAAGTAATAAATCAGCTCAAGCATCAGAAAATGAAGCTTCCATTACTGACCTATATCCTCGCTAA 918 0.3725 MIAVKRLSRDSGQGATEFKTEVLLLVKLQHRNLVKLLGFCLEGSERLLVYEFVPNKSLDYFIFDPIKRNQLNWASRYKIIEGVARALLYLHEDSRLRIIHRDLKASNILLDDNMNPKIADFGLARLFDRDQTQGNTNQIAGTYGYMAPEYAMYGQFSTKSDVFSFGVIVLEILSGKRHIGNGNGESEEQLISFVWRNWREGTAINIADPSLSNISPNEIMRCVHIGLLCVQENLADRPNMGSIVLMLNSYSVTLPTPSEPAFFVGSRTRSRPLSDIQSGGNNSSTSNKSAQASENEASITDLYPR* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3368 305 Gene3D Phosphorylase Kinase; domain 1 1 52 - -
Ahy19g3368 305 SUPERFAMILY Protein kinase-like (PK-like) 2 268 IPR011009 -
Ahy19g3368 305 PIRSF ILK 1 259 - -
Ahy19g3368 305 Pfam Protein tyrosine and serine/threonine kinase 2 244 IPR001245 GO:0004672|GO:0006468
Ahy19g3368 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 98 110 IPR008271 GO:0004672|GO:0006468
Ahy19g3368 305 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 2 288 - -
Ahy19g3368 305 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3368 305 Gene3D Transferase(Phosphotransferase) domain 1 53 255 - -
Ahy19g3368 305 SMART serkin_6 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3368 305 CDD STKc_IRAK 2 248 - -
Ahy19g3368 305 MobiDBLite consensus disorder prediction 270 298 - -
Ahy19g3368 305 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 288 - -
Ahy19g3368 305 MobiDBLite consensus disorder prediction 270 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3368 Ahy-Chr19 156549708 156551615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3368 2 305 Receptor kinase-like Gene Family AT4G21410 62.338 1.14e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy19g3368 PK_Tyr_Ser-Thr 3.70E-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3368 - - ahf:112777459 598.971