Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3367 ATGATCACATCAGGGAGGTTGTTTTCTTCTCTTTGTTGTCTCCTCTTAATGTTAATCACATGCGACGCCCAACAATATGATTTCATATATTACGAGTGTCAGAATGAGAAAGGTAACTACACAGAAAACAGCACCTACCACAAAAACCTCAATACCCTGTTTTCCACTCTCGCTTCCGACACAAAAATCGACTACGGTTTCTACAACTTGTCGTACGGCCAAAACGACGACAAAGTAAACGCCGTTGGGCTTTGCCAAGGAGACCTTAACCAAAGCGATTGTAGAAGGTGTCTAAACGATTCGAGAATCGTTCTTCCAAAGCATTGCCCAAACCAGAAAGAAGCTGTAGGCTGGTACGATCAATGCATGCTCCAATACTCAAACCGCACCATCTTCGGCAGTGGCTACGTTGACAATACCCCTATGCAATACTTGATTAACACGGACAACGCAACGGATGTGCAAGTGTTCAAACAAGAACGCGCAAGCTTGATGTCAAATCTGAGAAACAACGTGAGTGCAACCGGTGACTCTCGCCGCAAATATGCTGCGGGGAGTGTCACTGGTACGGATTTTCAAACCATATATGGGCTTGTGCAGTGCACGCCGGATCTTTCTAGCCAAAAGTGTGACGAATGTTTGGAGGGGATCGTGGATGTAACTCTGAATGATGGGAAGAAAGGTGGGAGAGTTCTTACTCCAAGATGTCATATTAGGTTTGAAACATACCGTTTCTTTCAGTTTCAGCCTACTACTACTAATAATAACAACACTACTACTTCCAAATCGCGATCTGTGATCGTCGTAGCAGTGCCATCTGTTACTGTTTTGGTGCTCATCATGTGTTCTATATGCGTCTATTTAAAAGTGAAAAGGCCAAGCAAACTTTCTGCAACCACATATGTTGAAGAAGAAATCACGATGAACGAGTCATTGCAGTTCGACTTTGATACCATACGAGTTGCTACAAGTGATTTCTCAAATTCTAATAAACTAGGACAAGGTGGATTTGGAGCCGTTTATAAGGGTCAGCTCTCCAATGGACAAATTATTGCCGTCAAAAGGTTGTCAAAGGACTCTGGCCAAGGAGCTACGGAATTTAAGAATGAAGTGCTTTTATTGGCCAAACTTCAACATCGAAATTTGGTTAAGCTCCTTGGTTTTTGTTTGGAAGGAATTGAAAGGTTGCTTATTTATGAGTTTGTTCCTAAAAAAAGTCTTGATTACTTCATATTTGATCCAATCAAGAAACGACAATTGAATTGGACAAGTCGGTACAAAATCATTAAAGGTGTTGCTCGAGGTCTTCTTTATCTTCATGAAGATTCTAGATTTCGTATTATACATCGTGACCTCAAAACAAGTAATATCCTCTTAGATGATGATATGAATCCTAAGATAGCAGATTTTGGATTAGCGAAACTGTTTGGCACGGATCAAACTCAGGGAAATACGAATCAAATTGTGGGAACATATGGATATATGGCACCCGAATATGCAATGTACGGACAATTTTCAACAAAGTCAGATGTTTTTAGCTTTGGTGTAATAGTCCTTGAAATTGTGAGCGGCAAAAGGCACATTGAGAATGGCAGTGAGGAGAGTATAGAGCAGCTACTAAGCTTTGTAAGTCCTCCTCCTCTGTATATTCATATAGGTTATGTTATCTTAAACATAATGTATGTTTGGAGAAATTGGAAGGAGAGAACAGCTATAAATATCATAGATCCATCATTAAGCAATATTTCACCAAATGACGTTATGAGATGCGTCCACATTGGTTTGCTTTGTGTTCAAGAAGATTTAGCGCATAGACCAAACATGAGTTCTATTGTATTGATGCTGGATAGTTGTTCTGTAACTATGCCAACACCTTCAGAACCTGCATTTTTTCTGGGGACTACTAGAACTAGAAGCCTTCCATTATCAGACATACATTCAGCGGAGAATAATACAACAACAAGAACAAGTGAATTCACAAGTAAATCAGCTCAAGAATCAGAAAATGAGGCTTCCGTTACTGAGCTATATCCTCGCTAA 2040 0.4015 MITSGRLFSSLCCLLLMLITCDAQQYDFIYYECQNEKGNYTENSTYHKNLNTLFSTLASDTKIDYGFYNLSYGQNDDKVNAVGLCQGDLNQSDCRRCLNDSRIVLPKHCPNQKEAVGWYDQCMLQYSNRTIFGSGYVDNTPMQYLINTDNATDVQVFKQERASLMSNLRNNVSATGDSRRKYAAGSVTGTDFQTIYGLVQCTPDLSSQKCDECLEGIVDVTLNDGKKGGRVLTPRCHIRFETYRFFQFQPTTTNNNNTTTSKSRSVIVVAVPSVTVLVLIMCSICVYLKVKRPSKLSATTYVEEEITMNESLQFDFDTIRVATSDFSNSNKLGQGGFGAVYKGQLSNGQIIAVKRLSKDSGQGATEFKNEVLLLAKLQHRNLVKLLGFCLEGIERLLIYEFVPKKSLDYFIFDPIKKRQLNWTSRYKIIKGVARGLLYLHEDSRFRIIHRDLKTSNILLDDDMNPKIADFGLAKLFGTDQTQGNTNQIVGTYGYMAPEYAMYGQFSTKSDVFSFGVIVLEIVSGKRHIENGSEESIEQLLSFVSPPPLYIHIGYVILNIMYVWRNWKERTAINIIDPSLSNISPNDVMRCVHIGLLCVQEDLAHRPNMSSIVLMLDSCSVTMPTPSEPAFFLGTTRTRSLPLSDIHSAENNTTTRTSEFTSKSAQESENEASVTELYPR* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3367 679 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Ahy19g3367 679 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 559 659 - -
Ahy19g3367 679 Gene3D Phosphorylase Kinase; domain 1 288 401 - -
Ahy19g3367 679 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Ahy19g3367 679 CDD STKc_IRAK 332 616 - -
Ahy19g3367 679 SUPERFAMILY Protein kinase-like (PK-like) 311 645 IPR011009 -
Ahy19g3367 679 MobiDBLite consensus disorder prediction 642 672 - -
Ahy19g3367 679 Pfam Protein kinase domain 327 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3367 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Ahy19g3367 679 SMART serkin_6 326 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3367 679 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 543 - -
Ahy19g3367 679 Gene3D - 25 130 IPR038408 -
Ahy19g3367 679 Gene3D - 138 245 IPR038408 -
Ahy19g3367 679 Gene3D Transferase(Phosphotransferase) domain 1 402 624 - -
Ahy19g3367 679 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 559 659 - -
Ahy19g3367 679 MobiDBLite consensus disorder prediction 642 679 - -
Ahy19g3367 679 ProSiteProfiles Protein kinase domain profile. 326 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3367 679 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Ahy19g3367 679 Pfam Salt stress response/antifungal 150 243 IPR002902 -
Ahy19g3367 679 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 543 - -
Ahy19g3367 679 ProSiteProfiles Gnk2-homologous domain profile. 139 245 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3367 Ahy-Chr19 156540003 156542894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3367 36 679 Receptor kinase-like Gene Family AT4G21410 45.668 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy19g3367 Pkinase 6.30E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3367 - - ahf:112776564 1326.23