Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3359 ATGGGAAATTTCTTGTTAGTTTATGAATACATGGATAATGGGAGTTTGGATAAGAGAGTGTTTTGTGATGAGAGCATGATGCTGAACTGTGAAGAGAGAATAAGAAATATCAAAGGTGTGGCCTTTGCTGTGTTGTATTTGCATGAAGGTTGGGAAGAACAAGTTCTGCATAGGGACATCAAAGCCAGCAATGTGTTACTTGATAAGGATATGAATGGAAAGCTTGGAGACTTTGGATTAGCAAGAATGCATAGCCATGGCCAAGTTGCTAGCACAACAAAGTTGGTTGGAACAGTTGGTTACATGGCTCCAGAAGTGATCAAGACTGGACAAGCCTCGACTCGCACGGATGTGTACATGTTTGGAATCTTGATTTTAGAGGTCATGTGTGGAAGGAGGCCTATGGAAGAAGGTAAGCCACCTCTTGTGGAGCTTGTGTGGGGACTAATGGTTAAAGGGGAACTAATGAATGCACTTGATGAGAGGTTAAGTGCTAAAGGAGACTTCAATCTGCAACAAGTTGAGAAGGTTCTTCAGTTGGGATTGTTGTGTGCATACCCTGAACCAAAATCAAGACCAAACATGAGACAAGTTGTGAGTATTTTAGAAGGGAACAATGAGGGAGGAGAAGAATCAGAGAATGAGAATGCGGATACTTGTTTGCTTCTAAAGTTGAAATCTGGGGATATTTTTTCTGAGTATTCTAATTATTTTAGCTATTCAACACACCCAACATTTGAAGATATTCGCCAGTCTAATACTTCTTCAATGTCTCTTACTTGGTCTAAATCTGTAGTTGAGGGTAGATGA 810 0.4037 MGNFLLVYEYMDNGSLDKRVFCDESMMLNCEERIRNIKGVAFAVLYLHEGWEEQVLHRDIKASNVLLDKDMNGKLGDFGLARMHSHGQVASTTKLVGTVGYMAPEVIKTGQASTRTDVYMFGILILEVMCGRRPMEEGKPPLVELVWGLMVKGELMNALDERLSAKGDFNLQQVEKVLQLGLLCAYPEPKSRPNMRQVVSILEGNNEGGEESENENADTCLLLKLKSGDIFSEYSNYFSYSTHPTFEDIRQSNTSSMSLTWSKSVVEGR* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3359 269 SMART serkin_6 2 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3359 269 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 3 262 - -
Ahy19g3359 269 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3359 269 Gene3D Transferase(Phosphotransferase) domain 1 11 227 - -
Ahy19g3359 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 55 67 IPR008271 GO:0004672|GO:0006468
Ahy19g3359 269 Pfam Protein kinase domain 3 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3359 269 SUPERFAMILY Protein kinase-like (PK-like) 3 203 IPR011009 -
Ahy19g3359 269 PANTHER - 3 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3359 Ahy-Chr19 156492729 156494804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3359 2 205 Receptor kinase-like Gene Family AT3G53810 52.153 1.16e-69 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy19g3359 Pkinase 1.50E-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3359 - - ahf:112696640 519.62