Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3346 ATGTCTTCTTCCTCCGCTAGCATGCTGTGCGTCGAAGACGCCAGCGAAGCAATCTCCGACCACCCCTCTCCGCCATCATTGACAGCACTCTGGCAGCCCTACGACGATGATTCCGACATCAGCGAACTCATCGACGCAGAGGCGCGGCACATGGCGTCGGCGGATTACCTCCGGCGGTGCGGCGATGGTTCGGTGGACGTGAGCGCACGGTTGGACGCCATCAACTGGATGTTAAAGGTGCAGGCATTCTATGAGTTCCATCCAGTAACGGCCTTCCTTTCCATCAACTACATGGACCGCTTCCTCTCCCTCGTTTCTCTTCCGGTACGATCCAGGTGGGCATTTCAGCTACTATCCGTGGCGTGTTTGTCTGTGGCGGCGAAAATGGAGGAGCCACAAGTGCCTCTCTTGCTTGACCTCCAGCTTTTCCAGCCAACCTTGGTGTTTCACCCCAAAACCCTTCGCAGAATGGAGCTTTGCCTCTTGTCTAATCTCAACTGGACACTCCGTTCCGTTACCCCCTTCCATTACCTTCATTATTACCTCACCAACCTCCCTTCTTCTTCTTCTTCTTTCAACCGGTTACAGTTACTCTCCGCTGCCTCCGACCTCATCCTCGCCTCCACCCGTGTGATTAAGTTCTTGGAGTTTCCGCCGTCCGCCGTGGCAGCTGCCGCCGTCCTCTGCTCAGCTGGCCACCACCACCCTCATGTATTCCACCACAGAGTAAACCATGAAATGGTGAGACGCTGTCACCAACTAATGGAGGACTACGTGCTGGACACGTGTCCCGCATCCACCACCAAAGCCACGCGAGGCCACCCGCCACCTCAGAGCCCCGTCGCCGTCCTCGACGTCTCCACCTGTGCCAGCTGCGACACCCCTTCTTCAGCCCGCCCCCAACATGACCCGCCAAACAAGCGGCTGCGATCCTCTCCCCCGGATGTACGGCAGCCGTAA 960 0.576 MSSSSASMLCVEDASEAISDHPSPPSLTALWQPYDDDSDISELIDAEARHMASADYLRRCGDGSVDVSARLDAINWMLKVQAFYEFHPVTAFLSINYMDRFLSLVSLPVRSRWAFQLLSVACLSVAAKMEEPQVPLLLDLQLFQPTLVFHPKTLRRMELCLLSNLNWTLRSVTPFHYLHYYLTNLPSSSSSFNRLQLLSAASDLILASTRVIKFLEFPPSAVAAAAVLCSAGHHHPHVFHHRVNHEMVRRCHQLMEDYVLDTCPASTTKATRGHPPPQSPVAVLDVSTCASCDTPSSARPQHDPPNKRLRSSPPDVRQP* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3346 319 ProSitePatterns Cyclins signature. 70 101 IPR006671 -
Ahy19g3346 319 MobiDBLite consensus disorder prediction 291 319 - -
Ahy19g3346 319 CDD CYCLIN 70 162 IPR013763 -
Ahy19g3346 319 Pfam Cyclin, C-terminal domain 172 271 IPR004367 -
Ahy19g3346 319 Pfam Cyclin, N-terminal domain 42 169 IPR006671 -
Ahy19g3346 319 Gene3D - 53 170 - -
Ahy19g3346 319 PANTHER CYCLIN-D2-1-LIKE 19 292 - -
Ahy19g3346 319 SUPERFAMILY Cyclin-like 34 169 IPR036915 -
Ahy19g3346 319 Gene3D - 42 235 - -
Ahy19g3346 319 SMART Cyclin_C_2 172 292 IPR004367 -
Ahy19g3346 319 PANTHER CYCLINS 19 292 IPR039361 -
Ahy19g3346 319 SMART cyclin_7 75 163 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3346 Ahy-Chr19 156409756 156411847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3346 40 269 Core Cell Cycle Gene Families AT1G70210 41.079 1.39e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3346 K18810 - gmx:100776178 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3346 19 156409756 156411847 Ahy19g3346 19 156409756 156411847 ECH
Ahy19g3346 19 156409756 156411847 Ahy9g2289 9 111845767 111847849 hybridization