Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3324 ATGGTTGATGCTTTGAATGAAGTGCAACGCAGCGGCAATGCATTTGTTGTTCCTGCTAAGAGGGATGCTGTATTGTTTGAAGGAGACAAAGATTTAGAGCCACACAATGGGATTGAATTCGAATCTCATGAAGCAGCATATTCATTTTATCAGGAATATGCCAAATCAATGGGATTCACAACTTCGATCAAGAATAGCAGACGCTCAAAGAAAACAAAAGAATTTATTGATGCCAAATTTGCGTGCTCTCGGTATGGCGTTACACCTGAGTCTGACAGCGGGAGCAGTCGAAGACCCAGTGTAAAGAAGACAGATTGCAAAGCCTGCATGCATGTGAAAAGAAGGTCAGAAGGGAAGTGGATCATTCATGAATTTATAAAGGAACACAACCATGAACTCTTACCGGCTTTGGCATATCATTTTCGTATTCATAGGAATGTCAAGTTAGCTGAAAAGAATAATATTGATATTTTGCATGCTGTTAGTGAACGAACCAGAAAAATGTATGTTGAGATGTCTAGGCAGTCTGGTGGGTGTCGAAATACTGGATCCCTCTTGGGGGACGCAAATGATCAGTTTGACAGAGGCCGACAGTTGGCTTTGGATGAGGGAGATGCCCATTTCATACTGGAGTATTTTAAGCGCATCCAAAAGGAGAACCCCTATTTCTTCTATGCTATCGATTTAAATGAAGAGCAACGTTTAAGGAATCTATTCTGGGTTGATGCAAAAAGTAGGAACGATTATCTTAGCTTTAATGATGCAGTCTCATTTGATACCACTTACATCAAAAGCAATGATAAGTTACCATTTGCTCCTTTCATTGGGGTGAATCATCACTCTCAACCTATATTGCTTGGGTGTGCTTTGCTTGCAGATGAGACCAAGCCAACATTTGTCTGGTTAATGAAGACATGGCTTAGAGCGATGGGAGGGCAAGCTCCCAAAATTATAATTACCGATCAAGACAAAGCCTTGAAGACAGCAATTGAAGAAGTCTTCCCAAATGCGAGACATTGCTTTGCTCTTTGGCACATACTTGAAAGGATACCTGAAAATCTATCTTCTGTGATCAAGCAGTATAAGAACTTCTTGCGAAAGTTAAACAAGTGCATTTTTAAGTCATGGACTGATGAAGAGTTTGACATGAGATGGTGGAAAATGGTCACTAGATTTGAACTTCAAGATGATCTATGGTGTCAATCACTGTATGAAGATCGGAAAAAGTGGGTGCCAACTTATATGGGGGATACTTTTTTAGCTGGAATGTCTACACCTCAGCGTTCTGAAAGTATGAACTCTTTCTTTGACAAATACATACACAAGAAAATCACCCTTAAAGAGTTTGTGAAACAATATGGGTTAATCCTTCAGAATAGGTATGAAGAGGAGGCAATTGCAGATTTTGATACATTGCACAAGCAGCCAGCACTCAGATCTCCTTCACCTTGGGAAAAACAAATGTCAACGGTTTATACACATGCTATATTTAAGAAATTCCAAGTTGAAGTTTTGGGTGTAGCTGGCTGTCAATCTAGAACAGAGCCTGGTGATGGATCAATTACAAAGTTTATAGTTCAAGATTATGAGAAAGATGAAGAGTTTTTGGTTACATGGAATGAGTTGAGCTCAGATGTCTCTTGTTTCTGTCGATTGTTTGAATATAAAGGTATCCTTTGCAGGCATGCGTTAAGTGTTCTCCAACGTTGTGGTTGTTCAAGTGTTCCACCTCATTATGTTATGAAAAGATGGACGAAAGATGCCAAAAGTAGGGAACCCATGGCAGATAGGACTCAGAAAGTACAAACAAGGGTGCAGCGTTATAATGATTTGTGTAAACGTGCTATTGATTTGAGTGAAGAAGGATCACTGTCTGAAGAGAGCTATAGTGTTGTTTTCCGTACACTTGTTGATACCCTGAAGAACTGTGTATATGTAAATAATTCTAACAACAATGGTGCAGAAACTAGCAACAATTCTTTTTCCGTTCATGAAGCAGAAGAAAATCAGGGTACCCTTCAATTGAAAGCAAGTAAGAAGAGGGGCACTGCTAGGAAAAGAAAGGTGCAGTCAGACCAGGAAGTTATGCTTGTTGACACACAAGATAGCCTGCAGCAAATGGATAATCTAAGCTCAGACACAATAACACTCAATGGATACTATGGTACCCAGCAGAGCATGCAAGGACTGCAGGTACGGTTGAACTTAATGGAGCCGCCTCATGATGGTTACTATGTCAATCAACAGAATATGCAAGGCTTGGGTCCCTTGAATTCTATGGCTCCTAGCCATGATGGGTTTTTTGGAGCTCAGCAAAGCATTCATGGGCTGGGAGGGCAACTGGAATTCCGCCCTGCTACTTCTTTCGGATATAGCCTTCAGGATGAGCCTGATCCTCTGTTCCATGGCAGTAGTTCTAGAAATACTTAG 2430 0.4066 MVDALNEVQRSGNAFVVPAKRDAVLFEGDKDLEPHNGIEFESHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDSGSSRRPSVKKTDCKACMHVKRRSEGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSRQSGGCRNTGSLLGDANDQFDRGRQLALDEGDAHFILEYFKRIQKENPYFFYAIDLNEEQRLRNLFWVDAKSRNDYLSFNDAVSFDTTYIKSNDKLPFAPFIGVNHHSQPILLGCALLADETKPTFVWLMKTWLRAMGGQAPKIIITDQDKALKTAIEEVFPNARHCFALWHILERIPENLSSVIKQYKNFLRKLNKCIFKSWTDEEFDMRWWKMVTRFELQDDLWCQSLYEDRKKWVPTYMGDTFLAGMSTPQRSESMNSFFDKYIHKKITLKEFVKQYGLILQNRYEEEAIADFDTLHKQPALRSPSPWEKQMSTVYTHAIFKKFQVEVLGVAGCQSRTEPGDGSITKFIVQDYEKDEEFLVTWNELSSDVSCFCRLFEYKGILCRHALSVLQRCGCSSVPPHYVMKRWTKDAKSREPMADRTQKVQTRVQRYNDLCKRAIDLSEEGSLSEESYSVVFRTLVDTLKNCVYVNNSNNNGAETSNNSFSVHEAEENQGTLQLKASKKRGTARKRKVQSDQEVMLVDTQDSLQQMDNLSSDTITLNGYYGTQQSMQGLQVRLNLMEPPHDGYYVNQQNMQGLGPLNSMAPSHDGFFGAQQSIHGLGGQLEFRPATSFGYSLQDEPDPLFHGSSSRNT* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3324 809 Pfam MULE transposase domain 256 348 IPR018289 -
Ahy19g3324 809 SMART 26again6 546 573 IPR006564 GO:0008270
Ahy19g3324 809 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 20 724 - -
Ahy19g3324 809 Pfam FAR1 DNA-binding domain 48 135 IPR004330 -
Ahy19g3324 809 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Ahy19g3324 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 724 IPR031052 GO:0006355
Ahy19g3324 809 Pfam SWIM zinc finger 537 570 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3324 Ahy-Chr19 156280395 156285006 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g3324 MULE 6.50E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3324 - - lang:109346405 1430.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3324 19 156280395 156285006 Ahy9g2314 9 111994436 111999045 hybridization