Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3308 ATGATGATCAAGGAAGATGAGGCTACTTTGACAACAGCCAAGGAACAACAAGGGGAAGGGATGATGAATGAAGGAAAGAACAATGACGAAAGTGATCATGAGAATAATCCTCAAGAGTGGTTGAACCTGAGCTTAGGAGGCAAATCACTCACAACAGCAGGGGACCCTGATTCATCATCATCACAAACAAGACCAGTCACTGCTACAAAAGTTTTCTCATGCAACTTCTGCATGAGGAAGTTCTATAGCTCACAAGCATTAGGGGGTCATCAGAACGCGCACAAAAGGGAAAGAGGTGCTGCAAGAAGATATCAGTCTCAGCGGACCATGGCCATGATGGGATTTCCCATGATGAGCACTCCAATGATGCGATCACTCGGTGTTCAGCCTCATTCACTGGTGCAAAAGCCATGCAGAGGTGGTGGAAGTGGAGGAGCCATGGTGGCACCAACCTTTCATGATGCATATGCATCATCAGGGCTTGGAATGGCATGGACACCTTTCATGGCTGAGGAGCCAACTGATCTGGTTTGGCCCGGAAGCTTTCGCTTGGTTCCACAACAACCGGAGCCGCAGCAGGAACCACTCAAGCTTGATTTAGACCTCAGACTGTGA 615 0.4846 MMIKEDEATLTTAKEQQGEGMMNEGKNNDESDHENNPQEWLNLSLGGKSLTTAGDPDSSSSQTRPVTATKVFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQSQRTMAMMGFPMMSTPMMRSLGVQPHSLVQKPCRGGGSGGAMVAPTFHDAYASSGLGMAWTPFMAEEPTDLVWPGSFRLVPQQPEPQQEPLKLDLDLRL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3308 204 Gene3D Classic Zinc Finger 53 116 - -
Ahy19g3308 204 SUPERFAMILY beta-beta-alpha zinc fingers 68 98 IPR036236 -
Ahy19g3308 204 PANTHER ZINC FINGER PROTEIN 4-LIKE 4 204 - -
Ahy19g3308 204 PANTHER ZINC FINGER PROTEIN 4-LIKE 4 204 - -
Ahy19g3308 204 MobiDBLite consensus disorder prediction 1 65 - -
Ahy19g3308 204 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Ahy19g3308 204 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Ahy19g3308 204 MobiDBLite consensus disorder prediction 185 204 - -
Ahy19g3308 204 MobiDBLite consensus disorder prediction 37 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3308 Ahy-Chr19 156144027 156147050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3308 2 190 C2H2 Transcription Factor Family AT1G24625 35.644 1.99e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3308 - - ahf:112779836 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3308 19 156144027 156147050 Ahy9g2332 9 112146147 112148604 hybridization