Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3301 ATGGAGGCCAAGGTTGATTTTGAGGTGGACAATTTGACCACAGCTACAGGGAGCAGTAGTTTCTCTCAACTACTCTTCGGAGATGACGATGATCATCATCAACATGCATTGGGTTTTGCTGCTGCTGTGGACCATCTCCCTCTTTTCTCCATTGACAAGCCACCCAAAATGCTCTCTTTTGGAGACTTTCAACCCCACCTCTTGCTCCCTGAAACCAACGCTACCCCTCAGAAATCTGTAATCACTTCAAGTGATTCTTCTTCTGCTTCTTCATGCAACCACACCACCACCGCCATTAACTCCATGTCCAAGACCAATAAAAAGCGAAATTGGCCGGGGCTACAACCCATTGTGAAGGTGCCTAACAGTAACAACAAGAAGAACAAAACAGAGAATCCTCCGAGTTCAACTTCAAGCGGTCATGCAAAGAAGAAGGAGAAACTCGGGGAACGAATTGCAGCATTGCAACAACTAGTTTCTCCCTTTGGGAAGACAGATACAGCTTCGGTGCTTCACGAGGCAATGGGCTACATAAGATTTCTCCATGACCAAGTTCAAGTGCTATGCTCCCCTTACTTGCAGCGCTTGCCTTCTTCTTCTTCTTCTCCTTCTTCATTTCAACATCAATGTGGGGAGGAGGAGGAGCAAGTGAAAGAAGACAAGAGGGACTTGAAGAGCATGGGACTCTGCCTCATCCCCCTCCAATCCACCCTACACGTGTCAAGTACCAACGGTGCTGATTTCTGGTCACCTGCTGGTGCAGCCAACAATCTTACACCTTATGCACACCACCAATCCAAATAG 804 0.4739 MEAKVDFEVDNLTTATGSSSFSQLLFGDDDDHHQHALGFAAAVDHLPLFSIDKPPKMLSFGDFQPHLLLPETNATPQKSVITSSDSSSASSCNHTTTAINSMSKTNKKRNWPGLQPIVKVPNSNNKKNKTENPPSSTSSGHAKKKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQRLPSSSSSPSSFQHQCGEEEEQVKEDKRDLKSMGLCLIPLQSTLHVSSTNGADFWSPAGAANNLTPYAHHQSK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3301 267 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 144 193 IPR036638 GO:0046983
Ahy19g3301 267 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 72 244 - -
Ahy19g3301 267 MobiDBLite consensus disorder prediction 200 219 - -
Ahy19g3301 267 CDD bHLH_AtbHLH_like 143 188 IPR045239 -
Ahy19g3301 267 Gene3D - 142 197 IPR036638 GO:0046983
Ahy19g3301 267 MobiDBLite consensus disorder prediction 117 139 - -
Ahy19g3301 267 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 72 244 - -
Ahy19g3301 267 MobiDBLite consensus disorder prediction 100 146 - -
Ahy19g3301 267 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 132 181 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3301 Ahy-Chr19 156081485 156083845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3301 128 252 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 52.381 4.40e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3301 - - gmx:100809317 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3301 19 156081485 156083845 Ahy19g3301 19 156081485 156083845 ECH
Ahy19g3301 19 156081485 156083845 Ahy9g2337 9 112193116 112195298 hybridization