Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3274 ATGGAATCGGTCCCTGCTGATGTATCAAATTTACCTCCTAGTAAAGACCCATCTCCTTCACCTCCAGTCAAAGAGACCGATGGACAAGCTTCTTCAGCTCCTGTAGCCTTTGGGCAAGATAGTTCTGCACATGTGGCACCATCTAAGCCATCCTCCACCGGGGCATCATCTTGGGCCAAAAACTTGAACATTTCTCAGCCATCTGGCTCACAAGATGACCCATCCACTGGAAATGCTGGGAAATCAACCTTTGCCCGCATAACCAGTAATTTGGGATTGCGTTTGTCACCAAAGTCTCCTCCGGCAGATGACAGTTCCAATGAGACACCAGCACAATCTAATATTTTTGGAAGTATCACAAGAGGTTTGGTTGACACTTCTAAGAATGCAGTGAAAGCTGTCCAGGTTAAGGCACGACATGTCGTTTCTCAGAATAAACGCAGATATCAGGAAGGAGGTTTTGATTTAGATATGACATATATCACAGAAAACATCATTGCTATGGGGTTCCCTGCTGGTGACATGAGCTCTGGGTTTTTCGGTTATGTTGAAGGATTTTACAGAAATCATATGGAAGAAGTTATTAAGTTTTTTGAGACTCACCATAAGGATAAATACAAAGTATACAATCTTTGTTCTGAGCGGCTGTATGATGCATCATTGTTTGAGGGAAAGGTGGCTAGCTTTCCATTTGATGACCATAATTGCCCCCCACTTCAACTGGTTATCTCATTCTGTCATAGTGCATACTCGTGGTTGAAGTTAGATATTGAGAATGTTGTGGTTGTCCACTGTAAGGCTGGAATGGCAAGAACAGGGTTGATGATTTCCAGTCTTCTATTATTCTTAAAGTTCTTTCCAACTGCTGAGGAGTCAATGGATTACTATAATCAAAAACGATGTGTTGATGGAAAAGGACTTGTTCTGCCCAGTCAGATTAGGTATGTCAAATATTTTGAACGTGTCTTGACTTACTTCAATGGCGAAAACCCACCTGCCCGTAGGTGCATGCTTAGGGGATTTCGGCTTCACAGGTGCCCTTACTGGATCAGGCCCTCTATAACTGTCTCAGACCATAGTGGTGTGCTGTTCTCTACCAAAAAGCATCCAAGGACCAAGGATCTTTTGCCGGAAGATTTCTGGTTCAGTGCTCCAAAGAAGGGAGTAATGGTCTTTGCTTTGCCAGGAGAGCCTGGTCTTACAGAATTGGCTGGGGACTTCAAAATTCATTTTCATGATCGCCAAGGAGACTTTTACTGTTGGTTGAACACAACTATGACAGAAAATAGAAAAGTATTGAACACCAATGATCTTGATGGCTTTGACAAGAGGAAATTGCCTTCTCCAGGATTCCTGGTTGAGGTTGTGCTGGTTGATTATAATGGTAATGTTGTGGCTTCCGAACCCGAGGCTACTGGAAAAAGATCAGATGAGAGTTCAAGTAATAGTGCCACCCCAGTTGAAGCAAGCATACCTGCGCAGAATACAGACAAAGAGTCAGGGAGTCGAGATAAAGATGATGTGTTTTCAGATGGTGAGTCGGAGCATTCTGCTTCTTCAAGAAGCAAGCAAGCAAAACCAGCTTCTGAACCAGTTAAAACGGTTAACAAGGCTACCAGTGGATCTGAAACCAACAAAATTTCAAATCAAGTTGCAAATCTAACAAATGCAACAGAACAAGTTTCTTTGGGAAGTGCAAGCTCGAAACCAGTTCATGCTGGTCAACCAAAAAGTGATAATGAAAGAACTGTGTCCGGTGTTGAGATGGCCAGCTCAGAAAGTGAGTTTAAGGCCATGGCTGCAGATGCATCTGTTTTTACATTTGGAGATGATGAAGACTACGAAAGTGATTAA 1854 0.4288 MESVPADVSNLPPSKDPSPSPPVKETDGQASSAPVAFGQDSSAHVAPSKPSSTGASSWAKNLNISQPSGSQDDPSTGNAGKSTFARITSNLGLRLSPKSPPADDSSNETPAQSNIFGSITRGLVDTSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKDKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPLQLVISFCHSAYSWLKLDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLLPEDFWFSAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKVLNTNDLDGFDKRKLPSPGFLVEVVLVDYNGNVVASEPEATGKRSDESSSNSATPVEASIPAQNTDKESGSRDKDDVFSDGESEHSASSRSKQAKPASEPVKTVNKATSGSETNKISNQVANLTNATEQVSLGSASSKPVHAGQPKSDNERTVSGVEMASSESEFKAMAADASVFTFGDDEDYESD* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3274 617 MobiDBLite consensus disorder prediction 24 114 - -
Ahy19g3274 617 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 328 IPR029021 -
Ahy19g3274 617 SMART PTEN_C2_2 331 459 IPR014020 -
Ahy19g3274 617 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
Ahy19g3274 617 Gene3D Protein tyrosine phosphatase superfamily 132 329 IPR029021 -
Ahy19g3274 617 MobiDBLite consensus disorder prediction 1 114 - -
Ahy19g3274 617 MobiDBLite consensus disorder prediction 498 520 - -
Ahy19g3274 617 ProSiteProfiles C2 tensin-type domain profile. 333 460 IPR014020 -
Ahy19g3274 617 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 261 300 IPR000387 GO:0016311|GO:0016791
Ahy19g3274 617 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 19 617 - -
Ahy19g3274 617 MobiDBLite consensus disorder prediction 468 585 - -
Ahy19g3274 617 MobiDBLite consensus disorder prediction 476 497 - -
Ahy19g3274 617 ProSiteProfiles Phosphatase tensin-type domain profile. 147 326 IPR029023 -
Ahy19g3274 617 CDD PTP_PTEN 157 321 IPR045101 GO:0016791
Ahy19g3274 617 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 19 617 - -
Ahy19g3274 617 MobiDBLite consensus disorder prediction 521 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3274 Ahy-Chr19 155854721 155859709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3274 38 617 Protein tyrosine phosphatase (PTP) family AT3G19420 69.309 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3274 K01110 - gmx:100784003 1045.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3274 19 155854721 155859709 Ahy9g2364 9 112470919 112475914 hybridization
Ahy5g0606 5 7722140 7727325 Ahy19g3274 19 155854721 155859709 PCT