Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3231 ATGGAGAAGGTCTGCGAATTCTGCACGGATTTGAGGCCACTTGTTTATTGTAAGGCTGATGCAGCTTATCTGTGTCTATCCTGTGATTCAAAGGTGCATTTTGCGAATGCACTGTCCAGCCGGCATCTTCGGACCCTTGTTTGTAACTCTTGTAGGTACCATCTTGCTTATGTGCAGTGTTTGGATCACAAAATATTAATTTGTCAAGAGTGTGATCAGAAGCTGCACGATGTGTCTTTACCACATCGAAAACGAGCTATCAGAAGTTTCATGGGTTGCCCTTCTGCTAAAGACTTTGCGATGCTATGGTGTTTTGGCTTGAATGAGATGGAAAACATCACCTGTGAGGATTTGTTTGGATCTGCTTCATGTGTTTCCGCTGATTCAAATATGGCACAAACCTCTGTACGGGCTAGAAGTCGAATATCATCTAAGGCCAAACTTCATGGGGGATCGAGCAGTCGACAAGGTCAGATATTATACAGTGATCAAGAGCGAAAAAAGATTCTGCAGCAGATTATTGATTTAAAACAGCTTCAGCTAAATGAGAATACTGATCAAACTATAAAGATAAATGGACCTGAAGAAGAAACAGACTTAACTTCTTCAGCATATCAAACTATCAAGAAATCAGATGAAAAGTTCAATAAGCAAGAACAAAATTCAAAGGATGTTGTGGAAAAAGACAGTCACACAGTGGAGCTGAATCCTGAACCTTTGCCTTCTACGTTTTCTCAGCTTGATAACTTACCTTCAATTGTAGATCTTCCCTTACATGGAGAGTTATTCTGGACAGGGAAAAGTCCACCCCGAAGTAATCAGTTGTGGTCCCAAAACATACAAGACCTTGGGATATGTGAAGAACTTGTTTGTCGAGATGATTTCAACATACCTGACGTTGATCTAACATTCCAAAACTTTGAGGAACTATTTGGAGATCAAGATCCAGTTAGAGCACTGCTTGATGATAATGATGTTTCCTGCTCCTCTTTAGAGAAGGATATGTCAATTGATAAGTCAGATATTGACAATCTAAGTGCAATAGAGGATTCTTCGGCAGCCATATCGATTACCATCTTGCAATCAGCTCATGAGAACAAGGATATCGATAGTACCAACATCCAGCATTATCCAAGAAGCACAGATCCTCCACACACAATTCGACCATTCGAGTCAACTGTGTCATCGTCTGTTTCAAGATTCTGGGCTGCAAGCAATCCTACTTATCACAATGACGGTGCCCTTTCTCCCTGCAGTGAAGAGAAAGGCTATTTAGGAAATTCAGCTGAATTGGAGATATCACATATGGAGGCCACACAAAATCTCACTCTCACGTATGAAGAGAAGCCATCTCGACGGAACGAGAAGCAAGTTCGACTCCCATCTGGGAAACCTGGAGCTAATGTAAGAAAGAAGGTGAAAGGCACTGCCAAGGCAGAAAGCTATTGA 1449 0.4148 MEKVCEFCTDLRPLVYCKADAAYLCLSCDSKVHFANALSSRHLRTLVCNSCRYHLAYVQCLDHKILICQECDQKLHDVSLPHRKRAIRSFMGCPSAKDFAMLWCFGLNEMENITCEDLFGSASCVSADSNMAQTSVRARSRISSKAKLHGGSSSRQGQILYSDQERKKILQQIIDLKQLQLNENTDQTIKINGPEEETDLTSSAYQTIKKSDEKFNKQEQNSKDVVEKDSHTVELNPEPLPSTFSQLDNLPSIVDLPLHGELFWTGKSPPRSNQLWSQNIQDLGICEELVCRDDFNIPDVDLTFQNFEELFGDQDPVRALLDDNDVSCSSLEKDMSIDKSDIDNLSAIEDSSAAISITILQSAHENKDIDSTNIQHYPRSTDPPHTIRPFESTVSSSVSRFWAASNPTYHNDGALSPCSEEKGYLGNSAELEISHMEATQNLTLTYEEKPSRRNEKQVRLPSGKPGANVRKKVKGTAKAESY* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3231 482 CDD Bbox1_BBX-like 4 47 - -
Ahy19g3231 482 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Ahy19g3231 482 MobiDBLite consensus disorder prediction 212 232 - -
Ahy19g3231 482 MobiDBLite consensus disorder prediction 447 482 - -
Ahy19g3231 482 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 425 - -
Ahy19g3231 482 SMART bboxneu5 1 47 IPR000315 GO:0008270
Ahy19g3231 482 SMART bboxneu5 48 87 IPR000315 GO:0008270
Ahy19g3231 482 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 425 - -
Ahy19g3231 482 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3231 Ahy-Chr19 155440710 155445508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3231 1 333 C2C2-CO-like Transcription Factor Family AT1G68190 38.235 5.02e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3231 - - adu:107467199 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3231 19 155440710 155445508 Ahy9g2410 9 112983867 112988007 hybridization