Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3209 ATGGTTGAGAGAATCAAATCCTTTGTTGAATTGAGCATGTATGAATTTGTTGTTTTGGTATTGATGCTTGTGGTGGCCGCAGCCACCGGAGAGAGAAGAGAATGTCCAGCTTCATTCAATTGTGGAGGTAATGTTGGGAACATCAGCTTCCCTTTCACTACAGCAGAGCGTCAGGAGTGTGGGCTTTTGGCCATACACAATTGTTCTGAGCCACCGCAGGTGAAAAGATGGGTGCAACTAAGTCACAAAGGCAAAACATTTTTAGTTATACGCGTATCTCAACAGAATGTTATTCAATTCAGAGATAAGGACTTGTACGATCTTCTGCAATCAAGAAATTGCAATGCCTTCCGATATAACTTTACTCTTTCTACTCCTCCCACCTTTCATGATTTTGCTTCCCTTGATATGGAATACAATACAACCCTCTATAGATGCAACCGTACCCTCCATGTTCCCCCTACTAAGGATATGTGCAATTATACGAATTGCACTGACATCGATATCTACTACGGCCTTTTCATGCGCACACCACAAATTGAGAGTTCGTTGGCCTCATGCACAAAGGTCTTGCTTCCAATCAAAGATGTTCCTGATGGCAATGATCCCTTCACATTCGTAAATGCTGATATCATCGCTAAGGTCACTTTGTCGCAAGAATGCACAGACTGTCACTATAAGCAAAGAGGCCAGTGCCAACTTGACAGCAAAAGCAAATTTTGTTGTGCCAACGTTAGGCCGCCGGAAAATACAAGGAAAAAAGATCTGAGTAAGAAGGCTAAATTGGGTCTAGGTTTGGGTATTGGCTTCTTAGTCATATTGATAATTGGGTTGCTCTTGCTCTTCCGAATCTACAAGAGAAAACGTGGCAACTCAGGCAGCAGCCACATTGAATCAAGATACTCTTATTCTGATTCCTCTTCCAATCCACACCTAGATAATGGTGCTGCTTACCTCGGAGTTCCACTCTTCTCCTACAAGGATCTTAAAGAAGCAACAAACAACTTTGACCATAACAAAGAACTTGGAGATGGAGGCTTTGGCACTGTCTACTACGGGAAACTCCAAGATGGAAGAGAAGTTGCTGTGAAGCGCTTGTATGAACACAACTACAGGAGAGTAGAGCAATTCATAAATGAAGTTCAGATCCTAACACGTTTGAGACACAAAAATCTTGTGTCTCTCTATGGCTGCACTTCGCGCCACAGCCGCGAACTGCTGCTTGTATATGAATATATTTCTAATGGCACGGTTGCTTGTCATCTCCATGGCGAATCAGCCGAGCGCAGCTTACTACCTTGGTCTACAAGAATCAAAATTGCCATAGAGACTGCTACTGCATTGGCTTATCTTCATGCTTCTGACATCATTCACCGTGATGTGAAGACCAACAACATTCTCCTTGACCATAACTTTACTGTCAAGGTTGCAGATTTTGGCCTTTCAAGACTATTCCCCATGGACGCAACCCATGTATCCACCGCGCCACAAGGGACTCCTGGTTATGTTGACCCTGAATATCACCAGAATTACCAGCTTACTAGCAAGAGTGATGTGTATAGTTTCGGAGTTGTGCTCATTGAGCTAATATCATCCATGCCTGCAGTTGATATGAACAGGGATAAGGATGAGATTAACTTATCAAATCTAGCCATGAAGAAGATTCAAAATAGTGCAATTATTGACTTGGTTGATCGTTCTCTCGGTTTTGATTCAGACAATAAGGTAAGGAGAATGATAGTTTCGGTGGCGGAGTTGGCTTTTCAGTGTTTGCAAAGAGACAAGGAGTTGAGACCTTGCATGGATGAAGTCTTGGATGAACTGAAGAAGATTGAGAGTGGCAAGGATCATGCAGAGCTTCAAGAGGAAGCTGATGTTGATGGTAATGAAGTTTCTCACAATAAGATTGTACATTCACTTCCACCACCATCACCTGAATGGGATGAAGTTGGATTATTGAAGCATATGAAGATACCACCACCTTCACCAATCACTGTCACTGATAATTGGGAAAGTAAATGCACCACGCCCAGCATCAGTGCTTAG 2046 0.4282 MVERIKSFVELSMYEFVVLVLMLVVAAATGERRECPASFNCGGNVGNISFPFTTAERQECGLLAIHNCSEPPQVKRWVQLSHKGKTFLVIRVSQQNVIQFRDKDLYDLLQSRNCNAFRYNFTLSTPPTFHDFASLDMEYNTTLYRCNRTLHVPPTKDMCNYTNCTDIDIYYGLFMRTPQIESSLASCTKVLLPIKDVPDGNDPFTFVNADIIAKVTLSQECTDCHYKQRGQCQLDSKSKFCCANVRPPENTRKKDLSKKAKLGLGLGIGFLVILIIGLLLLFRIYKRKRGNSGSSHIESRYSYSDSSSNPHLDNGAAYLGVPLFSYKDLKEATNNFDHNKELGDGGFGTVYYGKLQDGREVAVKRLYEHNYRRVEQFINEVQILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGESAERSLLPWSTRIKIAIETATALAYLHASDIIHRDVKTNNILLDHNFTVKVADFGLSRLFPMDATHVSTAPQGTPGYVDPEYHQNYQLTSKSDVYSFGVVLIELISSMPAVDMNRDKDEINLSNLAMKKIQNSAIIDLVDRSLGFDSDNKVRRMIVSVAELAFQCLQRDKELRPCMDEVLDELKKIESGKDHAELQEEADVDGNEVSHNKIVHSLPPPSPEWDEVGLLKHMKIPPPSPITVTDNWESKCTTPSISA* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3209 681 CDD STKc_IRAK 342 611 - -
Ahy19g3209 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Ahy19g3209 681 SMART serkin_6 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3209 681 ProSiteProfiles Protein kinase domain profile. 336 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3209 681 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 13 680 - -
Ahy19g3209 681 Coils Coil 601 621 - -
Ahy19g3209 681 Pfam Protein tyrosine and serine/threonine kinase 339 608 IPR001245 GO:0004672|GO:0006468
Ahy19g3209 681 Gene3D Transferase(Phosphotransferase) domain 1 413 626 - -
Ahy19g3209 681 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 680 IPR044652 -
Ahy19g3209 681 SUPERFAMILY Protein kinase-like (PK-like) 319 612 IPR011009 -
Ahy19g3209 681 Gene3D Phosphorylase Kinase; domain 1 310 412 - -
Ahy19g3209 681 MobiDBLite consensus disorder prediction 661 681 - -
Ahy19g3209 681 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Ahy19g3209 681 MobiDBLite consensus disorder prediction 665 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3209 Ahy-Chr19 155213697 155216931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3209 25 681 Receptor kinase-like Gene Family AT1G25390 48.498 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy19g3209 PK_Tyr_Ser-Thr 3.10E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3209 - - ahf:112712053 1157.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3209 19 155213697 155216931 Ahy9g2428 9 113184931 113187505 hybridization