Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3197 ATGCCTAATGGATCCCTTGAAAAGTTCATATGTGAGGAAAATTCAACTACAGTTGGTCACCAATTGGATTCCAGAAGTCTCTATGACATTGCAGTTGGTGTAGCGCGTGGATTAAATTATTTGCATCGAGGCTGCAATACCAGAATCTTGCATTTTGACATAAAGCCTCATAACATACTACTCGACAAGGATTTTTGTCCAAAGATTTCAGATTTTGGACTCGCCAAGATATGTCCAAGAAAAGAGAGTATTGTTTCCATGTCGTGTGCAAGAGGAACTATTGGATTTATTGCTCCAGAGTTGTTTTCAAGGAATTTTGGTGGAATATCTCACAAGGCAGATGTTTATAGTTATGGAATGATGGTTTTAGAAATGGTTGGAGGAAGAAACAATAAAAATGTGGAAGTTGATCGTTCTAGTGAGCTGTATTTTCCACATTGGATTTACAAGCGACTTGAACTAGATGAGGAGTTAGGATTGCGGTGTATCAAGAAGGAAAGCGATAGGGAAATAGTGAGAAAGATGACATTGGTGAGCTTGTGGTGCATACAGACTAATCCTTTGTACCGTCCGTCAATGAGTAAGGTGGTGGAGATGCTTGAAGGAAGCTTGGAATCATTTGAATTGCCGCCTAGGCCCTTTTTCAGTTCTTCTCCAACATCGCCAATTAATTACTCAAGTCATACATCTGAAAGTTTGTAG 702 0.3946 MPNGSLEKFICEENSTTVGHQLDSRSLYDIAVGVARGLNYLHRGCNTRILHFDIKPHNILLDKDFCPKISDFGLAKICPRKESIVSMSCARGTIGFIAPELFSRNFGGISHKADVYSYGMMVLEMVGGRNNKNVEVDRSSELYFPHWIYKRLELDEELGLRCIKKESDREIVRKMTLVSLWCIQTNPLYRPSMSKVVEMLEGSLESFELPPRPFFSSSPTSPINYSSHTSESL* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3197 233 Gene3D Transferase(Phosphotransferase) domain 1 1 212 - -
Ahy19g3197 233 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 222 IPR045874 GO:0004672
Ahy19g3197 233 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 2.1 1 222 - -
Ahy19g3197 233 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3197 233 Pfam Protein kinase domain 4 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3197 233 SUPERFAMILY Protein kinase-like (PK-like) 1 201 IPR011009 -
Ahy19g3197 233 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3197 233 PIRSF ILK 1 208 - -
Ahy19g3197 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 49 61 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3197 Ahy-Chr19 155128774 155130768 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3197 1 216 Receptor kinase-like Gene Family AT4G18250 59.009 4.46e-87 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy19g3197 Pkinase 2.80E-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3197 - - ahf:112779161 462.611