Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3192 ATGTACCGTTGTGTTATCATCAGCATCATCCTCTACTCTGTGTTGAGCAGAACCACTTTGTGCAGTTATGTGGATCCACAGTTTGAAGCATGTAAACCCCAAACATGCGGCAACCAATCCATAAGCTACCCTTTCTACATCCAATACAAGCAGGAACCTTTCTGTGGGTACCCTGGTTTTGGCATCTCTTGTGATAGTAATGGCTTCCCAGTTCTCAATCTCTCTAATACTCCTTACATCATCCATCAAATATTCTACCACAACCAATCACTCAGAGTCGCCAATGCTGCCTTTTCATCAACCAACACCACCACAGCTGATTATTGTCTTTCCCTTACACGGAACCTCACCCTTCCCTCAACCAAGATCTTCAGTCTTGTTCATCAGAATCATAATAAGGACATCTTACTGTTCTTCGGCTGTAACCTGTCATCCCTGCCCACAGAGTTGACAAATTACAGAATTGGGTGTTCTGAAGCCAACAACAAAACGGGTGGTTCGATTCTGGCATTGTATAAGGACGATGTCAAAACAGTAAGCTCGGTGTCTAAGAGTTGCGGGAGGGGCGGAGAGGTGGTGCACGCGGGGGTGGAAGAGAGTGAAGCAGGAGGGATACAAGAGGCGCTGAGGAGAGGGTTCATGCTGAATTGGAATGCGAGTGATTGTAAGCCGTGCAGTAGCAGCGGAGGAAGGTGTGGCTTCAATGTAACTATGTATTTTTTCCAGTGTTACTGCACTGATAGAATTCATGCTTCCAGATGTGTTATTCCAGATGGTAGAAGCAAGGCTTCCATGAAGATTGGACTTGCACTCGGACTAGCCTTTGCAGCTGCTGCAGTTATTCTGCTGTTAGTAATGGTCACCTACTACACAAGATGGAAGAAGGAAAACTCAAAACACCACCTGGTTGATGCCTTTTTGGAGAGACATGGACACCTTCAAATCAAGAGGTACAGCTATTCCGAGATGAAGAAAGTGACCAATTCCTTCAAAAACAAACTAGGCCAAGGGGGGTTTGGCAGTGTATACAAAGGACAATTACAGGACGGACGACATGTAGCAGTGAAGATCCTAAGTGAACTGAAAGGTGATGGTGATGATTTCATCAATGAAGTTGCTAGTATGAGCAGAACCTCTCACGTTAACATTATTGCTCTTCTTGGATTCTGCTTTCAAGGTTCCAAACGAGCTTTGGTTTATGAATTTATGCCCAATGGGTCACTTGAGAAGTTAATCTATGAAGAAAATGCTGTGATAGGGGATCGCCAATTGGATTGCCAGACTTTATATGATATTGCAATTGGTGTTGCCCGAGGACTTGAATATTTGCACAAGGGCTGCAATACTAGAATCTTGCATTTTGACATTAAGCCTCATAACATTCTATTAGATGAAAATTTCCTACCCAAAATTTCAGACTTTGGACTTGCAAAAATTTGCACAAGAAAAGAAAGTATAGTATCAATATTTGGTGCTAGAGGAACTGTAGGTTATATTGCCCCGGAGGTATTTTCTAGAAACTTTGGTGTAGTATCACATAAGTCAGATGTTTATAGTTATGGAATGATGGTCTTAGAAATGGTTGGAAGAAGAAAGAATATCAAGGCTGAAGTTGATGCATCGAGTGAGATATATTTTCCTTATTGGATACACAATAGACTTGTATCAAATCAAGAGCTTGGTCTGCAAAATATAAGAAATGAATATGATAATGAGATGGTCAGAAAGATGACAATAGTGAGTTTATGGTGCATTCAAACCAAGCCTTCAACTCGACCATCAATTAGTAAGGTGGTGGAAATGTTGGAAGGAAGAACTGAGTTGTTGCAATTGCCTCCTAAACCATATTGGTTTTCTCCTTCAAACTCTCCCTGA 1875 0.4187 MYRCVIISIILYSVLSRTTLCSYVDPQFEACKPQTCGNQSISYPFYIQYKQEPFCGYPGFGISCDSNGFPVLNLSNTPYIIHQIFYHNQSLRVANAAFSSTNTTTADYCLSLTRNLTLPSTKIFSLVHQNHNKDILLFFGCNLSSLPTELTNYRIGCSEANNKTGGSILALYKDDVKTVSSVSKSCGRGGEVVHAGVEESEAGGIQEALRRGFMLNWNASDCKPCSSSGGRCGFNVTMYFFQCYCTDRIHASRCVIPDGRSKASMKIGLALGLAFAAAAVILLLVMVTYYTRWKKENSKHHLVDAFLERHGHLQIKRYSYSEMKKVTNSFKNKLGQGGFGSVYKGQLQDGRHVAVKILSELKGDGDDFINEVASMSRTSHVNIIALLGFCFQGSKRALVYEFMPNGSLEKLIYEENAVIGDRQLDCQTLYDIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFLPKISDFGLAKICTRKESIVSIFGARGTVGYIAPEVFSRNFGVVSHKSDVYSYGMMVLEMVGRRKNIKAEVDASSEIYFPYWIHNRLVSNQELGLQNIRNEYDNEMVRKMTIVSLWCIQTKPSTRPSISKVVEMLEGRTELLQLPPKPYWFSPSNSP* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3192 624 ProSiteProfiles Protein kinase domain profile. 328 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3192 624 Gene3D Transferase(Phosphotransferase) domain 1 403 614 - -
Ahy19g3192 624 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 624 IPR045874 GO:0004672
Ahy19g3192 624 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Ahy19g3192 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Ahy19g3192 624 SUPERFAMILY Protein kinase-like (PK-like) 311 603 IPR011009 -
Ahy19g3192 624 Gene3D Phosphorylase Kinase; domain 1 305 402 - -
Ahy19g3192 624 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 10 624 - -
Ahy19g3192 624 Pfam Protein kinase domain 331 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3192 624 SMART serkin_6 328 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3192 624 Pfam Wall-associated receptor kinase galacturonan-binding 31 94 IPR025287 GO:0030247
Ahy19g3192 624 Pfam Wall-associated receptor kinase C-terminal 180 247 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3192 Ahy-Chr19 155081297 155084598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3192 24 615 Receptor kinase-like Gene Family AT5G38260 41.694 6.31e-149 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy19g3192 Pkinase 2.40E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3192 - - ahf:112712060 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3192 19 155081297 155084598 Ahy9g2431 9 113204018 113206791 hybridization