Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3187 ATGGGGATGGGTTCAAAATTGGAAGGACCGTCTACCCCAGCAAATCGACGTGACCCATATGAGGTTTTGTCTGTGTCAAGGGACTCTTCCGATCAAGAAATTAAAACTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCTGACAAGAATGCCAGCAATCCTGAAGCGTCAGAACTATTTAAAGAGGTTGCTTATTCTTATAGTATCTTGTCCGACCCGGAGAAGAGAAGGCAGTATGATAGTGCAGGATTTGAGGCACTTGATGCTGATAGCATGGACATGGAAATTGACTTGTCTAATCTAGGGACAGTCAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATCAAGACAACCATTTCAGCTAATGTTCTTGAGGAAGCTCTGAATGGGACAGTTACAGTCAGACCGCTTCCTATTGGAACATCAGTGAGCGGAAAGGTAGAGAAGCAATGTGCTCACTTTTTTGGTGTGACAATAAATGAGGAGCAAGCTGAGTCAGGGATTGTAATAAGAGTTACTTCAACTGCACAAAGCAAATTCAAGTTACTTTACTTTGAACAAGATGCAAATGGTGGCTATGGTTTAGCACTGCAGGAAGATAGTGAGAAAACTGGCAAGGTGACATCTGCCGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACCATGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCGGAACTAAAGCCTGGCACCCATATATTTGCTGTTTATGGGGATAACTTTTTTAAGACTGCTAGCTATACAATTGAGGCAGTATGTGCAAAATCATATGAAGATACCACCCAGAAACTTAAGGACATTGAGGCTCAGATTTTAAGAAAGAGGAATGAGCTACGCCAATTTGAAGCAGAATATAGAAAGGCATTGGCTCGCTACCAGGAAGTGACAGAGAGATATGCAAAAGAAAAACAATCTGTAGATGAGCTTCTGAAACAAAGAGACGGCATCCATTCATCCTTCACGATTGTCAAATCAACCAATGTTAGCGGGACTGCTAGTAATTTAAGCAATGGAAGCTCTAGCAAAGTTTCTGGTGATGAATCCAAAGGTGATAGCCCCGGGGAAGATGGAGGGTCGGATGGGAAGGACAAATCGGCCAAGAAGAAATGGTTTAACCTGAATCTTAAGGGCTCTGATAAGCGGTTGATTTAA 1245 0.4241 MGMGSKLEGPSTPANRRDPYEVLSVSRDSSDQEIKTAYRKLALKYHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDSAGFEALDADSMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEEQAESGIVIRVTSTAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTMNALAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAKSYEDTTQKLKDIEAQILRKRNELRQFEAEYRKALARYQEVTERYAKEKQSVDELLKQRDGIHSSFTIVKSTNVSGTASNLSNGSSSKVSGDESKGDSPGEDGGSDGKDKSAKKKWFNLNLKGSDKRLI* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3187 414 CDD DnaJ 18 72 IPR001623 -
Ahy19g3187 414 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 4 412 - -
Ahy19g3187 414 Coils Coil 288 343 - -
Ahy19g3187 414 SUPERFAMILY Chaperone J-domain 14 88 IPR036869 -
Ahy19g3187 414 MobiDBLite consensus disorder prediction 361 401 - -
Ahy19g3187 414 MobiDBLite consensus disorder prediction 379 401 - -
Ahy19g3187 414 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Ahy19g3187 414 MobiDBLite consensus disorder prediction 361 378 - -
Ahy19g3187 414 Pfam DnaJ domain 18 80 IPR001623 -
Ahy19g3187 414 PRINTS DnaJ domain signature 38 53 IPR001623 -
Ahy19g3187 414 PRINTS DnaJ domain signature 20 38 IPR001623 -
Ahy19g3187 414 PRINTS DnaJ domain signature 75 94 IPR001623 -
Ahy19g3187 414 PRINTS DnaJ domain signature 55 75 IPR001623 -
Ahy19g3187 414 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 4 412 - -
Ahy19g3187 414 Gene3D DnaJ domain 5 100 IPR036869 -
Ahy19g3187 414 ProSiteProfiles dnaJ domain profile. 18 83 IPR001623 -
Ahy19g3187 414 SMART dnaj_3 17 75 IPR001623 -
Ahy19g3187 414 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3187 Ahy-Chr19 155033743 155038106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3187 11 90 C2H2 Transcription Factor Family AT1G74250 43.529 1.60e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3187 - - gmx:100811270 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3187 19 155033743 155038106 Ahy19g3187 19 155033743 155038106 ECH
Ahy19g3187 19 155033743 155038106 Ahy9g2436 9 113237632 113242025 hybridization