Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3179 ATGTCTCATAGACTCCTCCCTGACAGCCTTAGGCAGCAAATCAGACAATATGAGCAGTACAAATGGCAAGAAACCAGAGGTGTTGATGAGGATAACTTGATTTGCAATCTTCCAAAGGATTTGAGAAGGGACATTAAGCGCCATCTTTGCTTGGCTTTGCTGATGAGAGTAGGTGGTAGCTCACCAAGTCTAGGTGCCACCATATATGCCTCCAGGTTTGCTGCCAATGCACTTAGATTGTTGTGCCATAACCACACAAGGAAGACAAGGATGCCGGAGAGAATACCACCCATGCTGCTTCAGAAGCCTGCGGAACCTGATTTTACTGATGAAGAGCAGGCTGCCTGTTCTCGGTGCAATGTTTATCACATTTTTCGTGGAAACAAAGCTTATGTTCCACATAGAGGAGGCCAGAAAAAGGTCACGTTGAAATGA 435 0.4575 MSHRLLPDSLRQQIRQYEQYKWQETRGVDEDNLICNLPKDLRRDIKRHLCLALLMRVGGSSPSLGATIYASRFAANALRLLCHNHTRKTRMPERIPPMLLQKPAEPDFTDEEQAACSRCNVYHIFRGNKAYVPHRGGQKKVTLK* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3179 144 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 58 111 - -
Ahy19g3179 144 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 57 - -
Ahy19g3179 144 Gene3D Helix hairpin bin 1 50 - -
Ahy19g3179 144 SUPERFAMILY cAMP-binding domain-like 1 57 IPR018490 -
Ahy19g3179 144 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 58 111 - -
Ahy19g3179 144 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3179 Ahy-Chr19 154933097 154935602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3179 1 57 Ion Channels AT5G53130 85.965 5.01e-29 108