Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3166 ATGATGAAAATAAGTTGCAACGGGTGCCGCATACTCCGCAAAGGTTGCAATGATGATTGCGTAATAAGGCCATGCCTGCAGTGGATAAACTCTCCGGAGTCCCAAGCCAATGCCACACTCTTCCTTGCCAAATTCTACGGTCGCACTGGCTTGCTCAACCTCATCACTGCTGCTCCCAAAAACCTTGCCCCGGCTGTGTTTAGGTCTCTCTTGTATGAAGCTTGTGGGAGAATAGTGAATCCCGCATATGGCTCCATGGGCCTCTTCTGGACGGGACAATGGGCCCGATGCGAGGCTGCTGTCCGTGCTGTCTTGATGGGGTCCAAGCCCAATGATGAGGTGGCACCTTTTCATTCCCCAAGCTGGGGGTCTTGTGACATACGCCACGTGCCAAGACTCAACACCGGTCTGGTCGACGTCAGAGACAGAACCGGGAAAATCTTCAAGCCCCAACCGCGAGTGGCTTTGCTGGAGTCGGATGTGCTGAGCCAGATTCAGCCCAACCGAGCCACCAAGGAAACCGAGATCAACTTGGAACTCTCTCTTGGCTTCCATTGA 558 0.5376 MMKISCNGCRILRKGCNDDCVIRPCLQWINSPESQANATLFLAKFYGRTGLLNLITAAPKNLAPAVFRSLLYEACGRIVNPAYGSMGLFWTGQWARCEAAVRAVLMGSKPNDEVAPFHSPSWGSCDIRHVPRLNTGLVDVRDRTGKIFKPQPRVALLESDVLSQIQPNRATKETEINLELSLGFH* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3166 185 Pfam Lateral organ boundaries (LOB) domain 5 103 IPR004883 -
Ahy19g3166 185 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 2 134 - -
Ahy19g3166 185 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 2 134 - -
Ahy19g3166 185 ProSiteProfiles LOB domain profile. 4 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3166 Ahy-Chr19 154731294 154732722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3166 2 132 AS2 family AT1G68510 64.964 5.30e-59 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy19g3166 LOB 2.30E-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3166 - - gmx:100779034 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3166 19 154731294 154732722 Ahy19g3166 19 154731294 154732722 ECH
Ahy19g3166 19 154731294 154732722 Ahy15g2801 15 145785623 145788712 ECH
Ahy19g3166 19 154731294 154732722 Ahy14g3413 14 142681267 142682838 ECH