Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3160 ATGCCGACGTGGAACCCACCGCCTTCATTGGCGCCAAAACCAACCGACGGTGATGCGACACGTGTCGATAATGGGACAAGTGTCCTAGCGAGGCTCCGATGGTGCAACCAGCTCTCCCCACAGGTGGAGCATCGGACTTTCACCTCCGAAGAAGATGACACCATAATCAGAGCTCACGCTCGGTTCGGCAACAAATGGGCCATTATAACCCGACTCCTTTTCGGCAAAACCGACAATACCATTAAGAACCACTGGAACTCCCCCTCAAACCGCCGGCGCCACCATAGTCGTGTCAACGGTGGTGGTGAGGTACTCGTTGCCGACGGTGATGGCGACGACGGAGATGGCGGACAGAAAGGGGAGGATGCGGATGGAGAGCCAGGAGTGTGCAGTGGAGATGTCGGAGGCTCGGAGTTGATGTTGGCGACGCGGGAGTTCTCGAGGGAGACAATGAAATCAATGGCGAAAGCTTGGAGGATTAAGGGTTAG 489 0.5624 MPTWNPPPSLAPKPTDGDATRVDNGTSVLARLRWCNQLSPQVEHRTFTSEEDDTIIRAHARFGNKWAIITRLLFGKTDNTIKNHWNSPSNRRRHHSRVNGGGEVLVADGDGDDGDGGQKGEDADGEPGVCSGDVGGSELMLATREFSRETMKSMAKAWRIKG* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3160 162 Gene3D - 46 99 - -
Ahy19g3160 162 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 93 IPR017930 -
Ahy19g3160 162 CDD SANT 46 86 IPR001005 -
Ahy19g3160 162 PANTHER TRANSCRIPTION FACTOR MYB73 30 96 - -
Ahy19g3160 162 SMART sant 43 91 IPR001005 -
Ahy19g3160 162 PANTHER MYB PROTEIN-RELATED 30 96 - -
Ahy19g3160 162 MobiDBLite consensus disorder prediction 1 22 - -
Ahy19g3160 162 ProSiteProfiles Myb-like domain profile. 39 87 IPR001005 -
Ahy19g3160 162 MobiDBLite consensus disorder prediction 87 134 - -
Ahy19g3160 162 SUPERFAMILY Homeodomain-like 22 93 IPR009057 -
Ahy19g3160 162 Pfam Myb-like DNA-binding domain 46 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3160 Ahy-Chr19 154607755 154608820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3160 30 92 MYB Transcription Factor Family AT4G37260 76.190 1.73e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy19g3160 Myb_DNA-binding 2.10E-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3160 K09422 - psom:113356916 112.849