Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3112 ATGGCGGTGGGAATATCAGTTCTGATAGCACTGAAAGCGACGGCGCTATTACTGTGCTTCGTGTACTTGAAGAACCATGGCTACACCCTCATCTCCGCCCCATTCCTCTACGCATCACTCGTTTCGTTCTTGGTCTCGATCGCATCTCACCCCTCCATTGACCTTCCCATGCTTTTAGGAAAGGACACCGATGGAACCTTCCCAATCTGGTCCCTCATGATGTTCAGCCCTTACTTGTACTTCGTCAGATTCTTCTCCGCGCTCCGAAGGCTCCGAAGCGGTGAACCACCATACACTGAAGTCCACCCTGGACTCTTCGTCGGAGGGTGGCCATCGTCGCGCCAGAAGCTGCCACCTGGCGACCCTGCCATCGTTGATTGCACCTGCGAGTTCCCGAGGTTGGAGGAGTTCTCTGGGCTTCCTTATCTGTGCATTCCCACATGGGATACAAGGTCACCCAAGCCCTCTGATATTGAATCTGCTGTTAAGTGGGCTTCTAAGAAGAGAGACCTCAATAAACCTATTTTTATTCACTGTGCTTATGGTCATGGAAGAAGTGTTGCTGTTATGTGTGCATTGCTAGTGGCACTGGGTATTGCAGAGGATTGGAAGAATGCTGAGAAGCTGATCAAACAAAAACGGCCTTACATCCGGATGAATGCCCTCCATCGCAAGGCCCTTGAAGAATGGTCCAAGCACAGGTTGTCCGCGCCAAAGAGGCAATGA 726 0.5138 MAVGISVLIALKATALLLCFVYLKNHGYTLISAPFLYASLVSFLVSIASHPSIDLPMLLGKDTDGTFPIWSLMMFSPYLYFVRFFSALRRLRSGEPPYTEVHPGLFVGGWPSSRQKLPPGDPAIVDCTCEFPRLEEFSGLPYLCIPTWDTRSPKPSDIESAVKWASKKRDLNKPIFIHCAYGHGRSVAVMCALLVALGIAEDWKNAEKLIKQKRPYIRMNALHRKALEEWSKHRLSAPKRQ* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3112 241 CDD DSP_bac 94 232 - -
Ahy19g3112 241 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 156 225 IPR000387 GO:0016311|GO:0016791
Ahy19g3112 241 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 83 235 IPR029021 -
Ahy19g3112 241 Gene3D Protein tyrosine phosphatase superfamily 98 236 IPR029021 -
Ahy19g3112 241 SMART dsp_5 97 233 IPR020422 GO:0006470|GO:0008138
Ahy19g3112 241 PANTHER - 3 239 - -
Ahy19g3112 241 Pfam Dual specificity phosphatase, catalytic domain 124 232 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3112 Ahy-Chr19 153995421 153998144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3112 133 238 Protein tyrosine phosphatase (PTP) family AT5G56610 30.000 1.00e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3112 - - aprc:113873203 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3112 19 153995421 153998144 Ahy9g2514 9 114250516 114253178 hybridization