Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy19g3081 | ATGTCTTCTCATCTTCACCAAGGGAATGCTGTCATGCCTATTCTCTTCTTCAAGATTATACTCAAAACTAACCTTAAAATTCTTAAAATACCCAACAAATTTGCACTGAAACATGGAAGTGGTTTGTCCAATCCAGTGTTCTTAAAGCCTCCAGATGGAACAAGGTGGAAGGTGTGTTTGAGCAAAAAGGATGATCAAGTTTGGTTTGAAAAGGGTTGGAAAGAATTCACTCAAAATTACTCTCTGGATCATGGATGCTTGGTTCTGTTTAAATATGAAGGAACTACTTCTTCCCAATTTGATGTCATTATAATTGATGACAGTGATTTAGAAATAGACTATTCTTCCTACAATGGAAATGATGATGATGATGATGTTTCAGTTCAGATTGTGAAGGAAATCCATCCATACAAGAAGAACAAAGAAACCATGAGAGGTGAGAAGAATGTGACTACTTCTTTGTCATTGAATCGGCCAAGGGAACCAAGAGCACGAGAAGAAGCTAACAAATTCGTATCTAACAACCCTTTTTTCACGGTGCTCATAAAGCCTCCTCATATCACACAATACCGACTGTGCATACCAGTTTTGGAAGGTTATGTGGATAATGAAGTGAAGAATGTGAAGCTTGAGTATGGGGATAGATCGTGGCCTGTGAAGATGCTTAGTTGTAACAAAATCTATACAAATCGCTTCCTTTCTGCTGGGTGGAACTTATTTGCACAAGAGAATGAGTTGAAGCCTGGAGATGTTTGTGTCTTTGAACTTGTTAATATGCAAGATTTGGTCTTTAAGGTTCATGTTGTTGCTGCCCATCATGCTTAA | 825 | 0.3806 | MSSHLHQGNAVMPILFFKIILKTNLKILKIPNKFALKHGSGLSNPVFLKPPDGTRWKVCLSKKDDQVWFEKGWKEFTQNYSLDHGCLVLFKYEGTTSSQFDVIIIDDSDLEIDYSSYNGNDDDDDVSVQIVKEIHPYKKNKETMRGEKNVTTSLSLNRPREPRAREEANKFVSNNPFFTVLIKPPHITQYRLCIPVLEGYVDNEVKNVKLEYGDRSWPVKMLSCNKIYTNRFLSAGWNLFAQENELKPGDVCVFELVNMQDLVFKVHVVAAHHA* | 275 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy19g3081 | 274 | CDD | B3_DNA | 177 | 268 | IPR003340 | GO:0003677 | |
Ahy19g3081 | 274 | ProSiteProfiles | B3 DNA-binding domain profile. | 13 | 108 | IPR003340 | GO:0003677 | |
Ahy19g3081 | 274 | PANTHER | B3 DOMAIN-CONTAINING | 12 | 270 | - | - | |
Ahy19g3081 | 274 | Pfam | B3 DNA binding domain | 177 | 267 | IPR003340 | GO:0003677 | |
Ahy19g3081 | 274 | Pfam | B3 DNA binding domain | 25 | 103 | IPR003340 | GO:0003677 | |
Ahy19g3081 | 274 | SUPERFAMILY | DNA-binding pseudobarrel domain | 173 | 269 | IPR015300 | - | |
Ahy19g3081 | 274 | SMART | B3_2 | 16 | 108 | IPR003340 | GO:0003677 | |
Ahy19g3081 | 274 | SMART | B3_2 | 177 | 270 | IPR003340 | GO:0003677 | |
Ahy19g3081 | 274 | Gene3D | - | 158 | 273 | IPR015300 | - | |
Ahy19g3081 | 274 | Gene3D | - | 13 | 109 | IPR015300 | - | |
Ahy19g3081 | 274 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 12 | 270 | - | - | |
Ahy19g3081 | 274 | CDD | B3_DNA | 15 | 106 | IPR003340 | GO:0003677 | |
Ahy19g3081 | 274 | ProSiteProfiles | B3 DNA-binding domain profile. | 177 | 272 | IPR003340 | GO:0003677 | |
Ahy19g3081 | 274 | SUPERFAMILY | DNA-binding pseudobarrel domain | 15 | 106 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy19g3081 | Ahy-Chr19 | 153570610 | 153572477 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy19g3081 | 120 | 266 | B3 DNA Binding Superfamily | AT3G18990 | 33.766 | 8.07e-15 | 71.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Ahy19g3081 | B3 | 5.60E-11 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy19g3081 | - | - | lang:109346569 | 250.366 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy19g3081 | 19 | 153570610 | 153572477 | Ahy9g2550 | 9 | 114613899 | 114615660 | hybridization |