Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3079 ATGTCTTCTCATCTTCACCAAAGGAATGCTGTCATGCCTATTCTCTTCTTCAAGATTATACTCAAAACTAACCTTAAAATTCTTAAAATACCCAACAAATTTGCACTGAAATATGGAAGTGGTTTGTCCAATCCAGTGTTCTTAAAGCCTCCAGATGGAACAAGGTGGAAGGTGTGTTTGAGCAAAAAGGATGATCAAGTTTGGTTTGAAAAGGGTTGGAAAGAATTCACTCAAAATTACTCTCTGGATCATGGATGCTTGGTTCTGTTTAAATATGAAGGAACTACTTCTTCCCAATTTGATGTCATTATCATTGATGACAGTGCTTTAGAAATAGACTATTCTTCCTACAATGGAAATGATGATGATGATGTTTCAGTTCAGATTGTGAAGGAAATCCATCCATACAAGAAGAACAAAGAAACCATGAGAGGTGAGAAGAATGTGACTACTTCTTTGTCATTGAATTGGCCAAGGGAACCAAGAGCACGAGAAGAAGCTAACAAATTCGTATCTAACAACCCTTTTTTCACGGTGCTCATAAAGCCTTCTCATATCACACAATACCTACTGTCCATACCAGGTTTGGAAGGTTATGTGGATAAGGAAGTGAAGTATGTGAAGCTTGAGAATGGGGATAGATCGTGGCCTGTGAAGATGCTTAGTTGTAGCAAAACCCCTTCAAATCGCTTCCTTTCTGCTGGGTGGAACTTGTTTGCACAAGAGAATGAGTTGAAGCCTGGAGATGTTTGTATCTTTGAACTTGTTAATATGCAAGATTTGGTCTTTAAGGTTCATGTTTTTGCTGCCCATCATGCTTAA 822 0.3832 MSSHLHQRNAVMPILFFKIILKTNLKILKIPNKFALKYGSGLSNPVFLKPPDGTRWKVCLSKKDDQVWFEKGWKEFTQNYSLDHGCLVLFKYEGTTSSQFDVIIIDDSALEIDYSSYNGNDDDDVSVQIVKEIHPYKKNKETMRGEKNVTTSLSLNWPREPRAREEANKFVSNNPFFTVLIKPSHITQYLLSIPGLEGYVDKEVKYVKLENGDRSWPVKMLSCSKTPSNRFLSAGWNLFAQENELKPGDVCIFELVNMQDLVFKVHVFAAHHA* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3079 273 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 12 270 - -
Ahy19g3079 273 Gene3D - 158 272 IPR015300 -
Ahy19g3079 273 SUPERFAMILY DNA-binding pseudobarrel domain 172 269 IPR015300 -
Ahy19g3079 273 Pfam B3 DNA binding domain 25 103 IPR003340 GO:0003677
Ahy19g3079 273 Pfam B3 DNA binding domain 176 269 IPR003340 GO:0003677
Ahy19g3079 273 SMART B3_2 16 108 IPR003340 GO:0003677
Ahy19g3079 273 SMART B3_2 176 269 IPR003340 GO:0003677
Ahy19g3079 273 CDD B3_DNA 176 268 IPR003340 GO:0003677
Ahy19g3079 273 Gene3D - 13 109 IPR015300 -
Ahy19g3079 273 ProSiteProfiles B3 DNA-binding domain profile. 176 271 IPR003340 GO:0003677
Ahy19g3079 273 ProSiteProfiles B3 DNA-binding domain profile. 13 108 IPR003340 GO:0003677
Ahy19g3079 273 PANTHER B3 DOMAIN-CONTAINING 12 270 - -
Ahy19g3079 273 CDD B3_DNA 15 106 IPR003340 GO:0003677
Ahy19g3079 273 SUPERFAMILY DNA-binding pseudobarrel domain 15 106 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3079 Ahy-Chr19 153555997 153557761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3079 121 268 B3 DNA Binding Superfamily AT3G18990 31.373 3.19e-14 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy19g3079 B3 4.10E-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3079 - - lang:109346569 283.878