Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3045 ATGCAATCTATCCGAAAATCGTTCAAGTCCTATGCTTCCTATAACAAACGTTCAAGAAGGTTTGCCGCGTCGGGAGGACCCGATTCTAGCCACGAGCACCTTCCAATCCTTCAAGACCAGGAATCTCATCACCATCATCGTCACCAACACCACCATTCTGACCCTCCTCCGTTATCTTCCATGGCCGGCGACTACGTCGTCAAGATCAATGACGGCGGCGATCCTGCCGGAGGAAACAAGATTTGGAGGGGTTCCAGCTACGATTTCTGGCCCGAAGATGCAAGTTCCGGCGACAATGCCGACGCCAAAGAGGAGAGCTTTGATTTCCGCCAATCTGGTGCGCCGCCGGTGCCGGAGGAGGACCCGCCGTCGCAGCTGATCGGAAGTTTCCTGCGCAAACAGATAGCTTCCGGTGAGATCTCGTTGGACATGGACATGGAGATGGAGGAGCTTCAGCGCAACTACGACGCCGGTGCAAGTACCGCCGCTGCCGCAGGAGGGAAGCTTTCGCCGGTGGAGGAGTCGCCGACGACGAGCATGAACAACCGCGTATCCAAGGAGCTCAAGGTTTCGTTCGAGGAACCCGCGCCACCGAATTTGATGGCTGATATGCCTAATAGCTCCGATGCCATCAGAAGAAGACACAGCAGGGACTTGCCGTCGACTGGAGATTTCCATCGGCCGCCGCATCCGCCGCACCACAGCAGGGAATTGCCGTCTCGGAGCGGCCAAAGTGGTGATGGCGAGGTTGTGAGGTGCACCTCTAACGGTTCCATAGAGAGAACTCTTTCCATGCAGAGCAGAAAATCAACATTGTTGAAGGCTAAAACCCGGTCCAGGTTGCTGGACCCACCAGAAGAACCCGAAAGAAAATCGGGTCGGATTGCCAAGTCGGGTCAGTTGTTCTCAGGGTTGCTTGGCAAGAAGAGTGGTGGTGATGACGATGATGAAGATGATCCATTTTTGGAAGAGGATCTTCCTGATAAGTATAAAAAATCTCAGTTTAGTATATGGGTTTTACTTCAATGGGTGGGGTTGATTTTGATCATTGCTGCATTGATTACAACTCTGAGTGTTCCTTTCTTGAGGGAGAAGAATCTTTGGCAGCTGAAGCTGTGGAAATGGGAGGTTATGATTCTTGTGTTGATATGTGGAAGGTTGGTATCTGGTTGGCTTATCAGAATAGCTGTGTTCTGCATTGAGAGAAACTTCCTTTTGAGGAAGAGAGTTCTGTATTTTGTGTATGGTGTGAAGCATGCTGTTCAGAATTGTGTTTGGTTAGGGCTTGTTTTGATAGCTTGGCACTTCTTGTTTGATCAGAAAGTTCAGAGAGAGGTTCATAGTAATTTTCTTGAGTATATTACCAAGTTTTTGGTGTGCTTGTTGGTTGGTACTCTGGTTTGGTTGGTGAAAACCCTTATGGTTAAGGTTCTGGCCTCTAGTTTCCATGTTAGCACATATTTTGATAGGATTCAAGAGTCACTGTTTAATCAGTTTGTTATTGAGACACTCTCCGGGCCGCCTTTGGTCGAGCTTCAGCGATATGAGGATGAGGAGCAAAGGATTCTTGAAGATGTCGAGAAGCTACAGAAAGCCGGAGTTACCATACCTCCTGACCTGAGGGCTACTGCCTTCGCGACCAACAAGAGTGGGAAGTTGAGGAGTGGGATGCTCCAGAAAAGCCCCAGGATGGTAAGTGGACGGTTCTCAAGACCTCTCTCTAAGAAGTCAGAAGATGGGAATAGTGGGATAACTATTGATCACCTGCATAAGCTGAATCCGAACAATGTCTCGGCTTGGAATATGAAAAGGCTGATCAATATGGTTCGGCATGGAGCTCTAACTACATTGGATGAACAGATACTTAACTCGACCAATGATGATGAGAATGCCACAGAGATTAGAAGTGAAAATCAGGCAAAAGGAGCAGCCAAGAAAATTTTTCAGAATGTTGCTTGTGGTAGCAGGTTCATATACAAGAAGGACTTACAGCGATTTATGCAAGAAGATGAAGTTGTGAAAACCTTGAGTCTCTTTGAAGGTGCATCCGAGACCGGAAGAATAAGCAAAGCATCCTTGAAGAACTGGGTGGTCAATGCCTTTAGAGAGAGGAGAGCACTCGCCTTGACATTGAATGATACGAAAACGGCGGTGAACAAGCTTCATCGAATGCTTAATTTCTTAGTTGCAATTATTATCCTAGTTATCTTTCTCTTGATAATGGGAATTGCCACCTCCAAATTTCTCCTCTTCGTGAGCTCACAGCTTGTCTTGGTTGCATTCATATTTGGAAATACCTGCAAGACCATATTTGAAGCCATTATTTTCTTATTTGTAATGCACCCGTTTGACGTTGGAGACAGATGCGAAATTGAAGGGGTCCAGATGGTCGTGGAAGAAATGAACATATTGAACACCATATTTCTGAGATATGATAATCTAAAGGTAATGATCCCTAACAGTGTCCTTGCTACAAAGGCCATAAACAACTTCTACCGCAGTCCTGACATGGGAGATTCTGTTGAATTCCTTATTCATGTGTCTACACCAATGGAAAAGTTTACTCAAATGAAACACAGAATACAGAGTTACATTGATAACAAGAAGGAGCACTGGTATCCATCACCATTTATAGTCTTCAAGGATTGTGAACTCTTAAACATGGTTCGCATTGCGGTTTGGCCAACACACAGGATGAACTTCCAAGACATGGGAGAGAGATTCATAAGGAGGTCGTTGTTGCTCGACGAGATGATCAAGATTTTCCGGGAGCTTGACATACAGTACCGACTGCAGCCGCTCGATATTAGTATTAGAAGCATGCCTACCACTTCTGAGCGTCTTCCACCAAGTTGGTCAACAATCACAAGTTGA 2874 0.4631 MQSIRKSFKSYASYNKRSRRFAASGGPDSSHEHLPILQDQESHHHHRHQHHHSDPPPLSSMAGDYVVKINDGGDPAGGNKIWRGSSYDFWPEDASSGDNADAKEESFDFRQSGAPPVPEEDPPSQLIGSFLRKQIASGEISLDMDMEMEELQRNYDAGASTAAAAGGKLSPVEESPTTSMNNRVSKELKVSFEEPAPPNLMADMPNSSDAIRRRHSRDLPSTGDFHRPPHPPHHSRELPSRSGQSGDGEVVRCTSNGSIERTLSMQSRKSTLLKAKTRSRLLDPPEEPERKSGRIAKSGQLFSGLLGKKSGGDDDDEDDPFLEEDLPDKYKKSQFSIWVLLQWVGLILIIAALITTLSVPFLREKNLWQLKLWKWEVMILVLICGRLVSGWLIRIAVFCIERNFLLRKRVLYFVYGVKHAVQNCVWLGLVLIAWHFLFDQKVQREVHSNFLEYITKFLVCLLVGTLVWLVKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVELQRYEDEEQRILEDVEKLQKAGVTIPPDLRATAFATNKSGKLRSGMLQKSPRMVSGRFSRPLSKKSEDGNSGITIDHLHKLNPNNVSAWNMKRLINMVRHGALTTLDEQILNSTNDDENATEIRSENQAKGAAKKIFQNVACGSRFIYKKDLQRFMQEDEVVKTLSLFEGASETGRISKASLKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILVIFLLIMGIATSKFLLFVSSQLVLVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIEGVQMVVEEMNILNTIFLRYDNLKVMIPNSVLATKAINNFYRSPDMGDSVEFLIHVSTPMEKFTQMKHRIQSYIDNKKEHWYPSPFIVFKDCELLNMVRIAVWPTHRMNFQDMGERFIRRSLLLDEMIKIFRELDIQYRLQPLDISIRSMPTTSERLPPSWSTITS* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3045 957 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 4 954 - -
Ahy19g3045 957 MobiDBLite consensus disorder prediction 19 123 - -
Ahy19g3045 957 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 4 954 IPR016688 -
Ahy19g3045 957 MobiDBLite consensus disorder prediction 238 272 - -
Ahy19g3045 957 Coils Coil 512 532 - -
Ahy19g3045 957 MobiDBLite consensus disorder prediction 279 294 - -
Ahy19g3045 957 Gene3D - 782 831 IPR023408 -
Ahy19g3045 957 MobiDBLite consensus disorder prediction 303 322 - -
Ahy19g3045 957 PIRSF Memb_At2g17000 36 957 IPR016688 -
Ahy19g3045 957 SUPERFAMILY Sm-like ribonucleoproteins 772 831 IPR010920 -
Ahy19g3045 957 MobiDBLite consensus disorder prediction 216 294 - -
Ahy19g3045 957 Pfam Mechanosensitive ion channel 724 928 IPR006685 GO:0016020|GO:0055085
Ahy19g3045 957 MobiDBLite consensus disorder prediction 216 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3045 Ahy-Chr19 153236256 153241019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3045 70 957 Mechanosensitive Ion Channel Family AT1G78610 55.761 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3045 K22048 - gmx:102665658 1290.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3045 19 153236256 153241019 Ahy19g3045 19 153236256 153241019 ECH
Ahy19g3045 19 153236256 153241019 Ahy9g2583 9 114897815 114902484 hybridization