Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3044 ATGCTGATGGTGGCGATGCACGACAACGATACCTGCGCCACAGCCACCGCCACCGACACGGGATTGAACCACCACGTTCCTCCCGCTCCGTCCACTGCCTCCACCTCCTCCTCGCCGGCGCACACCCGCCAGCAGCGCCAGAGGCTCGAAGTCTACAATGAGGTCCTTCGCCGCCTCAAGGATTCCGGCGTCTCCGAAGCTATGCAGCCTGGCTTCGACGATCAGCTCTGGAACCACTTCAACCGCCTCCCCGCACGGTACGCGCTGGATGTGAATATTGAGAGAGCCGCGGATGTTCTTATGCACAAGAGATTGCTGCATTTGGCTCACGATCCTGTTAATAGGCCTGCAATTGAAGTTCGCTTAGTACAGGTTCCGCCTGTAACTGATGCAAACTCAGCTTATACTGTCCAGTCGGATGCAATTGAAAATGAATCAGATCAAAGCTCCCCAAAGTACTCTAGCAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTGGCTCTTGAAGAAATGGATGAGGAACATTCTGTACATGCCAGTGCACAATATTCACGGCCCATGCATGAAATCACCTTCTCAACTGATGACAAACCAAAGCTTCTCAGTCAGTTAACTGCTTTGCTTGCTGAGATTGGACTGAACATCCAAGAGGCCCATGCCTTTTCCACAACTGATGGCTACTCGTTAGATGTGTTTGTTGTTGATGGATGGCCCTATGATGAAACAGAGAAGCTTAAAACAGCGTTGGAAAAAGAGGTCATAAAGATTGAGAGGAGGTCAACGTCGAGTAGGCAATCAGTATCTTCTGTTGGCGAAGATGAAGAAGCAAGGATGAAAAGTGAATCTGATCAGTTGAATATACCTAACGATGGGACAGATGTTTGGGAGATAGATCCCAAGCATTTGAAAATTGGAACTCAAATTGCGTCTGGGTCATATGGTGAACTATTTAAAGGTATATATTGTAGCCAGGAAGTAGCCATTAAAATTCTCAAGCCTGAGCATGTAAATTCAGATTTGCAGAGAGAGTTTGTGCAGGAAGTGTACATCATGAGAAAGGTTCGACACAAAAATGTTGTACAATTTATAGGAGCTTGTACCAAGCCCCCACGCTTATGCATAGTTACAGAATTTATGTCCGGTGGTAGTGTGTATGACTACTTACATAAGCGGAAGGGTAGTTTTAAATTTCCTACCTTGCTCAAAGTTGCAATTGATGTTGCTAAAGGAATGAACTACTTGCACCAGCATGAGATAATCCATAGAGATTTGAAAGCTGCCAATCTTTTGATGGATGAAAATGGTATTGTAAAAGTTGCTGATTTTGGGGTTGCTAGAGTTAAAGCTCAGTCAGGAGTTATGACAGCAGAAACTGGAACGTATCGGTGGATGGCTCCAGAAGTTATAGAACACAAGCCGTACGATCACAAGGCTGATGTATTTAGTTTTGGAATTGTTTTATGGGAGTTGCTTACTGGAAAGCTTCCCTACGAATATTTGACGCCTCTACAAGCAGCAATAGGAGTGGTTCAAAAGGGTTTACGACCAACCATCCCCAAGAACACACATCCAAATTTTGTTGAGCTTCTTGAGAGGTCTTGGCAGCAAGATCCTACATTGAGACCCGATTTTGCAGAAATCATTGAGATCTTGCAGCAGTTAGCTAAGGAGGTTGGGGATGAAGGAGAGGAGCGGCGCAAGGATAAAACGGGAGGATTTCTGTCTGTTCTTAGAAGAGGTCATCACTGA 1773 0.4563 MLMVAMHDNDTCATATATDTGLNHHVPPAPSTASTSSSPAHTRQQRQRLEVYNEVLRRLKDSGVSEAMQPGFDDQLWNHFNRLPARYALDVNIERAADVLMHKRLLHLAHDPVNRPAIEVRLVQVPPVTDANSAYTVQSDAIENESDQSSPKYSSRQSIHPPPAFGSSPNLEALALEEMDEEHSVHASAQYSRPMHEITFSTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVDGWPYDETEKLKTALEKEVIKIERRSTSSRQSVSSVGEDEEARMKSESDQLNIPNDGTDVWEIDPKHLKIGTQIASGSYGELFKGIYCSQEVAIKILKPEHVNSDLQREFVQEVYIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKRKGSFKFPTLLKVAIDVAKGMNYLHQHEIIHRDLKAANLLMDENGIVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPNFVELLERSWQQDPTLRPDFAEIIEILQQLAKEVGDEGEERRKDKTGGFLSVLRRGHH* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3044 590 ProSiteProfiles Protein kinase domain profile. 310 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g3044 590 MobiDBLite consensus disorder prediction 137 164 - -
Ahy19g3044 590 MobiDBLite consensus disorder prediction 137 169 - -
Ahy19g3044 590 Gene3D Transferase(Phosphotransferase) domain 1 389 579 - -
Ahy19g3044 590 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 35 577 - -
Ahy19g3044 590 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 35 577 - -
Ahy19g3044 590 PRINTS Tyrosine kinase catalytic domain signature 421 439 IPR001245 GO:0004672|GO:0006468
Ahy19g3044 590 PRINTS Tyrosine kinase catalytic domain signature 530 552 IPR001245 GO:0004672|GO:0006468
Ahy19g3044 590 PRINTS Tyrosine kinase catalytic domain signature 486 508 IPR001245 GO:0004672|GO:0006468
Ahy19g3044 590 PRINTS Tyrosine kinase catalytic domain signature 467 477 IPR001245 GO:0004672|GO:0006468
Ahy19g3044 590 PRINTS Tyrosine kinase catalytic domain signature 384 397 IPR001245 GO:0004672|GO:0006468
Ahy19g3044 590 SUPERFAMILY Protein kinase-like (PK-like) 296 559 IPR011009 -
Ahy19g3044 590 MobiDBLite consensus disorder prediction 16 46 - -
Ahy19g3044 590 Gene3D - 195 267 - -
Ahy19g3044 590 CDD ACT_TyrKc 195 261 - -
Ahy19g3044 590 Coils Coil 247 267 - -
Ahy19g3044 590 Gene3D Phosphorylase Kinase; domain 1 300 388 - -
Ahy19g3044 590 MobiDBLite consensus disorder prediction 16 47 - -
Ahy19g3044 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Ahy19g3044 590 Pfam Protein tyrosine and serine/threonine kinase 310 559 IPR001245 GO:0004672|GO:0006468
Ahy19g3044 590 SUPERFAMILY ACT-like 195 259 IPR045865 -
Ahy19g3044 590 MobiDBLite consensus disorder prediction 270 298 - -
Ahy19g3044 590 ProSiteProfiles ACT domain profile. 197 271 IPR002912 -
Ahy19g3044 590 CDD STKc_MAP3K-like 316 559 - -
Ahy19g3044 590 SMART serkin_6 310 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3044 Ahy-Chr19 153206782 153213937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3044 35 589 MAP Kinase Kinase Kinase AT4G35780 66.607 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Ahy19g3044 PK_Tyr_Ser-Thr 3.40E-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3044 - - gmx:100805180 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3044 19 153206782 153213937 Ahy19g3044 19 153206782 153213937 ECH
Ahy19g3044 19 153206782 153213937 Ahy9g2584 9 114908294 114915594 hybridization