Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3038 ATGTTGATGCATTGCAGGGGTTTGTTTAAGCCAGTTATTATCTTGATTATTGTTAACTTAGCTATGGCTATTGTAAATTTACTTATGAAGAAGGTTCTTAATGGAGGAATGGACAACATGTCCATTGTAACATATAGACAAGCAGTTTCATTTATCTTCATGGCACCTATTGCCTGCTTGTATGAAAGGAAACACAAATTGGAGGCTCACATAATATGTCTCCTTTTCCTCAGCTCTCTTGTCGGAGTAACACTCACCCAATACATATTTCTTCTTGGACTTGAATATACGTCTGCAACGTTCTCATGTGCATTCCTCAATGCTGTGCCAGTATTCACCTTCATCGTGGCACTGCCATTTGGGATAGAGAAGGTAAACATCACAAGCAAGAGTGGGAAAGCCAAAATCTTAGGGACTGTTGTGTGCATTGGTGGAACTTTGGTACTGATCCTCTATAAAGGAATGCCCTTAATCAACCCCCAAGCACAACACACAGCAAACGAAGCATCAAGTGGTCCTCCAGCCAGAAAGTTAGAAAAATGGATCATAGGTTCAATATTTCTGATTACAGGGTGCCTTCTTTGGTCTTCATGGTTTATCATACAAGCAAAGATTAGCAAAAGATATCCATGTCAATACTCTAGCACAGCTATTTTGTCCCTTTTTTCTGCCATTCAATCAGCAATATTAACATTAATCATCAAGGGAAATAATGCCTCCTGGATTCTCAAAGGAAAGCTTGAAATAATGAGTGTTATATATGCTGGATTGGTGGGATCAGGCTTGTGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGGGGTCCAGTTTTTACTTCAGCATTTACCCCCCTTGTACAAATATTTGTGGCAGTGCTTGATTTCTCTATATTAAAGGAAGAAATTTACCTAGGAAGTGTTGCAGGATCGGCCTTGGTTATTACTGGCTTGTATATTCTTCTGTGGGGGAAAAGTAACGAGAACGCACCATGTGTCAAGGATGCACAAGCAAGCCAACAAGATGTAGAATTGCAATAG 1038 0.3988 MLMHCRGLFKPVIILIIVNLAMAIVNLLMKKVLNGGMDNMSIVTYRQAVSFIFMAPIACLYERKHKLEAHIICLLFLSSLVGVTLTQYIFLLGLEYTSATFSCAFLNAVPVFTFIVALPFGIEKVNITSKSGKAKILGTVVCIGGTLVLILYKGMPLINPQAQHTANEASSGPPARKLEKWIIGSIFLITGCLLWSSWFIIQAKISKRYPCQYSSTAILSLFSAIQSAILTLIIKGNNASWILKGKLEIMSVIYAGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLVQIFVAVLDFSILKEEIYLGSVAGSALVITGLYILLWGKSNENAPCVKDAQASQQDVELQ* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3038 345 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Ahy19g3038 345 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Ahy19g3038 345 PANTHER WAT1-RELATED PROTEIN 10 343 IPR030184 GO:0016021|GO:0022857
Ahy19g3038 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 325 - -
Ahy19g3038 345 PANTHER WAT1-RELATED PROTEIN 10 343 - -
Ahy19g3038 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3038 Ahy-Chr19 153091748 153094689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3038 8 255 Nodulin-like Gene Family AT3G30340 45.600 3.69e-78 239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3038 19 153091748 153094689 Ahy9g2589 9 114973359 114975302 hybridization