Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy19g3035 | ATGGAGAACGACACCGCCGCCACCAACACCAACGGCAGCGCCACCGCCACCGCCAAACTCGCAATTGCCGGTGGGAAATCAAACAGCCACAACGAGGAAGAGGACCGCACCAATTTCAACAACGGCGTGGAGGAGCACATGGCGGAGCAAGTGGATGAAGAAGAAGAGGAAGAAGCAGAAGCAGAAGAAGACGGTGACGGTGGCGAAGGCGGTGAAGGGGAACAAACTGGATCTGCTTCTCGGCAACCTTCGAGAACCCCTTTCACCAATCTCAGCCAGGTCGATGCTGACCTTGCCCTTGCCCGAACCCTTCAGGAACAGGAAAGGGCATACATGATGCTTAGAATGAATAATGAAGGAAGTGACTATGGAAGTTGGGAAGCTGGGAGTTATTTGCATGATGATGGAGATGATTTTGATGATCTGCATGATGGAACTGATCTGGATGAAGACGATGAGGACGACGATGATGATGACGAGGAGGATTATGAGAATGAAGATGAAGATGCATTTGATGTCCATGCTCATGATGATGCTGGAGAACATGATAATCCTAGCATTGAATTTGATCCAGATGTATTTTCAAGTGATGAAGCCTATGCAAGGGCATTACAAGAGGCTGAAGAGAGGGAAATGGCAGCTAGACTCCTGGCACTTGCTGGGATAAATGACCGCGAGGCTGGGGAAGCAGAGGAGCATGGTGCTAATTCTCAGGATGCATGGGAAGATGTTGATCCAGATGAACTTTCATATGAGGAATTACTGGCATTGGGTGAAGTAGTTGGAACTGAGAGCAGAGGTCTTTCAACTGATACTCTTGCCGGTCTGCCATCAATCAAGTACAAGACTGGGAGTGATCAACATGGAAGCAATGATTCGTGTGTCATCTGTCGGATGGACTATGAGGACGACGAGTCCTTGACAGTTCTTTCCTGCAAACATCTGTACCATCCTGAGTGCATCAATAATTGGTTGAAAATAAACAAGGTTTGCCCTGTTTGCAGTACTGAGGTATCTGCTTCCGGGAGCAGCTAG | 1035 | 0.485 | MENDTAATNTNGSATATAKLAIAGGKSNSHNEEEDRTNFNNGVEEHMAEQVDEEEEEEAEAEEDGDGGEGGEGEQTGSASRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEAGSYLHDDGDDFDDLHDGTDLDEDDEDDDDDDEEDYENEDEDAFDVHAHDDAGEHDNPSIEFDPDVFSSDEAYARALQEAEEREMAARLLALAGINDREAGEAEEHGANSQDAWEDVDPDELSYEELLALGEVVGTESRGLSTDTLAGLPSIKYKTGSDQHGSNDSCVICRMDYEDDESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSASGSS* | 345 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy19g3035 | 344 | MobiDBLite | consensus disorder prediction | 140 | 168 | - | - | |
Ahy19g3035 | 344 | MobiDBLite | consensus disorder prediction | 75 | 93 | - | - | |
Ahy19g3035 | 344 | MobiDBLite | consensus disorder prediction | 169 | 188 | - | - | |
Ahy19g3035 | 344 | ProSiteProfiles | Zinc finger RING-type profile. | 294 | 335 | IPR001841 | - | |
Ahy19g3035 | 344 | Coils | Coil | 44 | 64 | - | - | |
Ahy19g3035 | 344 | MobiDBLite | consensus disorder prediction | 28 | 42 | - | - | |
Ahy19g3035 | 344 | PANTHER | E3 UBIQUITIN LIGASE BIG BROTHER-RELATED | 39 | 343 | - | - | |
Ahy19g3035 | 344 | Pfam | Ring finger domain | 292 | 334 | IPR001841 | - | |
Ahy19g3035 | 344 | SMART | ring_2 | 294 | 334 | IPR001841 | - | |
Ahy19g3035 | 344 | MobiDBLite | consensus disorder prediction | 119 | 192 | - | - | |
Ahy19g3035 | 344 | MobiDBLite | consensus disorder prediction | 48 | 70 | - | - | |
Ahy19g3035 | 344 | CDD | RING-H2_PA-TM-RING | 294 | 334 | - | - | |
Ahy19g3035 | 344 | PANTHER | E3 UBIQUITIN LIGASE BIG BROTHER-RELATED | 39 | 343 | IPR043312 | - | |
Ahy19g3035 | 344 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Ahy19g3035 | 344 | SUPERFAMILY | RING/U-box | 285 | 339 | - | - | |
Ahy19g3035 | 344 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 259 | 341 | IPR013083 | - | |
Ahy19g3035 | 344 | MobiDBLite | consensus disorder prediction | 1 | 93 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy19g3035 | Ahy-Chr19 | 153077962 | 153081291 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy19g3035 | 84 | 238 | C3H Transcription Factor Family | AT3G19910 | 54.839 | 8.34e-36 | 128 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy19g3035 | K19045 | - | gmx:100787418 | 448.358 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy19g3035 | 19 | 153077962 | 153081291 | Ahy9g2590 | 9 | 114987072 | 114990422 | hybridization |