Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3029 ATGTCTAACACCGACGGAACCTCTAACGCCGTTACCAACATTGACACACACCGTCACCACTCACAGCAACAACCAACTAACGGCGCCCTCGTCGTCAAAAAGCCCCCATCCAAAGACCGACACAGCAAGGTCGACGGACGCGGCCGCCGTATTCGGATGCCTATCATCTGCGCCGCCCGCGTCTTCCAGCTCACCCGCGAGCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCAATCATCGCCGCCACCGGAACTGGAACCACTCCCGCCAGCTTCTCCTCCGTTTCCGTCTCCGTACGAGGCGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCCGCAGCGTCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGCGCATACGCACCGACGACGACGCTTCCGCCAAGGACGACGGCGTCTCCGTGGGGCCCGCCGTGGGGTCCTTAGTGGGCCCCGGAGCTCCCGCGGGGCTCTGGGCCCTCCCGGCCAGGCCCGATTTCGGTCAAATTTGGAGTTTCGCAACGGCTGCTCCTCCGCCGGAGATGGTTGTGCAGTCGGCGGCGGTGTCGGTGTCTCAGCAGCAGCAAGCTTCTTTGTTCGTTCACCATCAACATCAGCAGCAGCAACAAGCCATGGGAGAAGCTTCGGCGGCGAGGCTGGGAAATTACCTTCCTGGACATCTGAATTTGCTGGCTTCTTTGTCGGGAGGGCCCGGAAACTCCGGCCGGAGAGACGATGAGCCTCGCTGA 801 0.6255 MSNTDGTSNAVTNIDTHRHHSQQQPTNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGAGSLSSPSSTSAASSLDHKPLLAPTPFILGKRIRTDDDASAKDDGVSVGPAVGSLVGPGAPAGLWALPARPDFGQIWSFATAAPPPEMVVQSAAVSVSQQQQASLFVHHQHQQQQQAMGEASAARLGNYLPGHLNLLASLSGGPGNSGRRDDEPR* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3029 266 MobiDBLite consensus disorder prediction 34 49 - -
Ahy19g3029 266 MobiDBLite consensus disorder prediction 1 30 - -
Ahy19g3029 266 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 263 - -
Ahy19g3029 266 MobiDBLite consensus disorder prediction 108 127 - -
Ahy19g3029 266 Pfam TCP family transcription factor 37 147 IPR017887 -
Ahy19g3029 266 ProSiteProfiles TCP domain profile. 37 91 IPR017887 -
Ahy19g3029 266 MobiDBLite consensus disorder prediction 1 49 - -
Ahy19g3029 266 MobiDBLite consensus disorder prediction 108 128 - -
Ahy19g3029 266 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 263 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3029 Ahy-Chr19 153035834 153038206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3029 22 266 TCP Transcription Factor Family AT5G23280 66.532 2.24e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy19g3029 TCP 5.00E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3029 K16221 - cpap:110813909 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3029 19 153035834 153038206 Ahy19g3029 19 153035834 153038206 ECH
Ahy19g3029 19 153035834 153038206 Ahy9g2598 9 115038119 115040479 hybridization