Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2982 ATGATCGAAGTGAGTCACATGCCGCACAGCGTAAAAAGGAATAGAGGATCGTGTTTCTTCTCTTTCTCTCTCTGGATGGTGGTGAAGATGATAGAATGGCAGAAGCAGTTACAGAATAATGAGAAGGCAGATCGTACTAACAACAATATGATGTTTGTGAAGGTTATGACTGATGAACAGTTAGAAACTCTGAGGAAGCAGATTGCGGTTTATGCCACTCTCTGTGACCAGCTCGTTGAGATGCATAGAACACTCTCCACTCACCACGATCTTACAGGAGTTCGGGTGGGAAATATATACTGCGATTCATTGATGACATCAGCAGGGCAGAAAATAACGTCTAGGCAGAGGTGGACACCAACACCATTGCAGCTTCAAATTCTTGAGCGGATATTTGATCAAGGAAATGGAACTCCAAGCAAGGAGAAGATTAAAGAGATCACTGCTGAACTTAGCCACCATGGCCAGATTTCTGAAACAAATGTATACAATTGGTTCCAAAACAGGCGTGCAAGATCAAAGAGGAAGCTTCAAAATAATGTGCCACCTACTACTATTGAATCAGAAGTAGATGCTGAGGTTGATTCTAAGGATAAGAAGACAAGGCCAGAGGAGTTAATTGGTTCCCAACAACAACAACATAGTACCATCATAATGACTAATGCTTCTGCTACTAATAGGCCAGAAAAGTTGTGCTTTCAAAACCCTGAGTTGCAGTATTTAAATAATCAACATCCAAACAAGAACAACAAATCAGATCCCATTTTCACATCAGATGGCACTCTAAGACCCTTAAGGAATTTTAGTCGTATGCCTGTTTTTGATGATGTTCTATCAAACTCAAGGGGAGATTATCTAGATGGAAAAATGGAAGTAGGTGGAATGTATAATTTATATCAGCAAGGAGGAGACTACAACTTGGGGGGTTGA 930 0.4075 MIEVSHMPHSVKRNRGSCFFSFSLWMVVKMIEWQKQLQNNEKADRTNNNMMFVKVMTDEQLETLRKQIAVYATLCDQLVEMHRTLSTHHDLTGVRVGNIYCDSLMTSAGQKITSRQRWTPTPLQLQILERIFDQGNGTPSKEKIKEITAELSHHGQISETNVYNWFQNRRARSKRKLQNNVPPTTIESEVDAEVDSKDKKTRPEELIGSQQQQHSTIIMTNASATNRPEKLCFQNPELQYLNNQHPNKNNKSDPIFTSDGTLRPLRNFSRMPVFDDVLSNSRGDYLDGKMEVGGMYNLYQQGGDYNLGG* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2982 309 Pfam Homeodomain 115 175 IPR001356 GO:0003677
Ahy19g2982 309 PANTHER - 30 307 - -
Ahy19g2982 309 MobiDBLite consensus disorder prediction 190 205 - -
Ahy19g2982 309 MobiDBLite consensus disorder prediction 174 215 - -
Ahy19g2982 309 CDD homeodomain 115 176 IPR001356 GO:0003677
Ahy19g2982 309 SMART HOX_1 113 180 IPR001356 GO:0003677
Ahy19g2982 309 SUPERFAMILY Homeodomain-like 113 178 IPR009057 -
Ahy19g2982 309 PANTHER WUSCHEL-RELATED HOMEOBOX 13 30 307 IPR044559 GO:0003700
Ahy19g2982 309 Gene3D - 116 181 - -
Ahy19g2982 309 ProSiteProfiles 'Homeobox' domain profile. 111 176 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2982 Ahy-Chr19 152517452 152519929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2982 30 309 Wox Gene Family AT4G35550 47.651 9.15e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ahy19g2982 Homeodomain 1.20E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2982 - - ahf:112777216 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2982 19 152517452 152519929 Ahy9g2641 9 115391460 115393917 hybridization