Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2953 ATGGCTCTGGAAGTTGCTGTGAAAGCTGCTGCCGGTGCTCCCAATGTTCTCGGAGACTGTCCATTTTGCCAGAGGGTGCTCTTAACTTTGGAGGAGAAGAAAGTCCCTTACTCCACCCACCTCATCAATTTCGACGAAAAACCCCAATGGTTTTTGGATGTCAATCCTGAAGGCAAGGTTCCAGTGCTCAAGTTTGATGACAAATGGATTTCCGATTCCGATGTCATTGTTGGAATCCTTGAGGAAAAGTACCCTCAACCCTCTCTCGTCACTCCCCCTGAATCTGCCTCCGTGGGATCCAAGTTATTTGGGGCTTTCGTGAAGTTTCTCAAGAGCAAAGATCCAAATGATGGATCAGAGCAAGCATTGCTTGCTGAGTTGAAGGATTTGGATGAACATCTTAAGAACCATGGTCCATTTGTTGCTGGGGAGAAGGTCACCGCTGTTGATTTGAGTTTGGCTCCAAAACTCTACCATCTAGTCATAACACTTGAGCACTTCAAAAACTGGACTATTCCTCAGGATTTGGCACATGTCCACAACTATACCAAGTTGTTGTTCTCCCTGGAATCGTTTGAGAAAACCAAGGCTGCAAAGGAGTATGTAATTGCGGGATGGGCACCCAAGGTGAATGCATGA 639 0.4632 MALEVAVKAAAGAPNVLGDCPFCQRVLLTLEEKKVPYSTHLINFDEKPQWFLDVNPEGKVPVLKFDDKWISDSDVIVGILEEKYPQPSLVTPPESASVGSKLFGAFVKFLKSKDPNDGSEQALLAELKDLDEHLKNHGPFVAGEKVTAVDLSLAPKLYHLVITLEHFKNWTIPQDLAHVHNYTKLLFSLESFEKTKAAKEYVIAGWAPKVNA* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2953 212 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 211 - -
Ahy19g2953 212 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 211 IPR044627 GO:0033355|GO:0045174|GO:0098869
Ahy19g2953 212 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Ahy19g2953 212 SUPERFAMILY GST C-terminal domain-like 83 210 IPR036282 -
Ahy19g2953 212 CDD GST_N_family 20 77 - -
Ahy19g2953 212 SFLD Main (cytGST) 19 184 - -
Ahy19g2953 212 Pfam Glutathione S-transferase, C-terminal domain 118 182 - -
Ahy19g2953 212 Gene3D - 90 212 - -
Ahy19g2953 212 CDD GST_C_DHAR 89 209 - -
Ahy19g2953 212 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Ahy19g2953 212 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Ahy19g2953 212 Gene3D Glutaredoxin 1 89 - -
Ahy19g2953 212 SFLD Glutathione Transferase (cytosolic) 19 184 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2953 Ahy-Chr19 152230034 152232725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2953 1 212 Glutathione S-transferase Gene Family AT1G75270 73.239 5.15e-115 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2953 K21888 - pop:7489598 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2953 19 152230034 152232725 Ahy9g2666 9 115612587 115615395 hybridization