Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2941 GATGATCGGCCCGCACCGCCGGCAGCACCCAACATTGTGATGTCGTCGAAGGATCACGATTCTCTCTTCAGCGGTGGTGGCATCAGCTTTCTCTCTGGAAGTCGAAATGGAAGATTTAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCTTCAATGGAGGATTTTTTTGAGACCAAGATATCAGAGGTTGATGGTCAGACTGTTGCCTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCCGAACTGCAGAATACCTGAAGGATAATCTGTTTAAAAATTTAAGTAGCCATCCTGACTTTATCAAAGACACAAAGACTGCTATTGTTGAAGCATTTAAACAGACAGATGTTGATTATCTCAATGAGGAAAAGGGCCATCAGAGGGATGCTGGGTCCACTGCATCAACAGCTATGTTGTTGGGCGACCGAATTCTTGTTGCAAATGTTGGCGATTCCAGAGTAGTTGCATCCAGAGCTGGTACAGCTGTTCCTTTGTCTATCGATCACAAACCTGATAGATCTGATGAGCGTCAAAGGATTGAGGAGGCAGGGGGATTCATAATTTGGGCAGGGACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGATAAACTTCTTAAACCATACGTTGTTGCTGACCCAGAGATTAAGGAAGAAGAAATAGATGGTGTGGATTTTATCATAATCGCCAGTGATGGTCTTTGGAATGTCATATCAAACAAGGAGGCGGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCGTCCAGAGAACTCATTAAAGAAGCTTATGCGCGAGGAAGCTCAGACAACATCACTTGTGTCGTTGTTCGATTTGATCTCTCCTGA 867 0.4418 DDRPAPPAAPNIVMSSKDHDSLFSGGGISFLSGSRNGRFSYGYSSFKGKRSSMEDFFETKISEVDGQTVAFFGVFDGHGGSRTAEYLKDNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAMLLGDRILVANVGDSRVVASRAGTAVPLSIDHKPDRSDERQRIEEAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIKEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2941 288 SMART PP2C_4 29 283 IPR001932 -
Ahy19g2941 288 ProSiteProfiles PPM-type phosphatase domain profile. 40 285 IPR001932 -
Ahy19g2941 288 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 13 288 - -
Ahy19g2941 288 SUPERFAMILY PP2C-like 33 286 IPR036457 -
Ahy19g2941 288 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Ahy19g2941 288 PANTHER ALPHABET, ISOFORM E-RELATED 13 288 - -
Ahy19g2941 288 Pfam Protein phosphatase 2C 41 278 IPR001932 -
Ahy19g2941 288 Gene3D - 33 287 IPR036457 -
Ahy19g2941 288 CDD PP2Cc 39 285 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2941 Ahy-Chr19 152133918 152138023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2941 12 288 PP2C-type Phosphatase Gene Family AT1G43900 73.285 9.58e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2941 K17506 - gmx:100776867 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2941 19 152133918 152138023 Ahy9g2678 9 115683952 115688569 hybridization