Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2932 ATGTCATCTCGCGTTGTAGCAGACAATGCATTACCTGTAACCAATACGACGCCGTATTTTGGAATGACGGAACTCGACGATTACACGCGGCGTTCAGCCGCCATCGGCGGGTCTCCTACTCTGGGACAGCTCCTGAAACACGTTGGCGACGTGCGTAAGGAAGTTGTTGGCGACGGAAGTGAGACGCCGGTGCACCAAGCTCTCGAGATTGGTGACGACGGCGTCGGAATAGAGCCACGCTCACTGCCGTTTGTACTCTCCTTCAACAATTTGACCTACAGCGTCAAAGTCCGTCGGAAACTGACTTTCTCGGCGATACTTCCTCGGCGCCGGAGCCGTCTCGGCGCGGCGGCGGATTCGGAAGCACCGGCAGTGGGAGATAGAATGTTCTCACGGACCAAGACTCTGCTAAACGACATCTCCGGCGAGGCTCGCGACGGCGAGATCATGGCGGTTCTTGGCGCCAGTGGCTCTGGAAAATCCACCTTGATCGACGCACTGGCGAACCGCATCGCTAAGGGAAGGTTGAAAGGAACGGTGGCACTGAATGGCGAGGCGCTGGATTCTCGCCTCCTGAAGGTTATCTCCGCCTACGTGATGCAAGACGACCTCCTCTTCCCCATGCTCACCGTCGAAGAAACACTCATGTTCGCCGCCGAGTTCCGCTTGCCCCGCACACTCTCTAAATCAAAGAAGAAAGCACGTGTCCAAGCACTAATCGACCAGCTAGGTATCCGAAATGCCGCGAAAACTGTCATCGGAGACGAAGGCCACCGCGGAGTATCCGGCGGAGAGCGTCGTCGAGTGTCAATCGGAATCGACATAATCCACGACCCTATCATCCTCTTTCTTGACGAGCCAACCTCCGGACTTGACTCCACGAGCGCATTCATGGTGGTGAAGGTTCTACAAAGAATCGCACAGAGCGGAAGCATCGTTATCATGTCCATCCACCAGCCGAGTTACCGAATCTTAGGGCTTCTCGACCGAATGATCTTCCTCTCACGTGGCCAAACCGTCTACAGCGGCTCACCGGCTCAGCTTCCGTCGTTCTTCGCGGAGTTCGGACACCCTATACCGGACGCAGAGAACCGAACCGAGTTCGCATTGGACCTCATTCGGGATCTAGAAGGTTCCCCAGGCGGAACCAAAAGCTTAGTAGAGTTCAACAAGTCCTGGCAGTCCATGAAGCACCCTGCACCCGCAGCACACAGTAACAACACCGTCAACGACCAAAACGGCATGTCGTTGAAGGAAGCAATAAGCGCAAGCATTTCGCGCGGGAAACTAGTCTCAGGCGCAAGCGCAACCAACACGAATTCTTCAAATCCTTCTTCAATGGTTCCAACCTTCGCGAACCCGATCTGGATGGAGATGGCCACACTATCAAAACGTTCGTTCTTGAACTCTCGAAGAATGCCAGAGCTTTTCGGGATTCGGTTAGGTGCGGTTATGGTGACAGGATTCATCCTAGCAACCATGTTCTGGAAGCTCGATAACTCCCCGAAAGGAGTGCAAGAAAGGCTCGGGTTCTTCGCATTCGCCATGTCCACCACCTTCTACACCACCGCAGACGCGCTCCCAGTGTTCCTCCAAGAACGCTATATCTTCATGCGAGAAACAGCTTACAACGCATACAGAAGATCCTCCTATCTTGTTTCCCACGCGCTCGTCTCGTTGCCTTCGCTGTTGTTCCTCTCATTGGCGTTCTCATCAATCACGTTTTGGGCCGTGGGCCTTGACGGTGGTATTTCGGGCTTTCTGTTTTACTTTTTGATAATATTCGCTTCATTTTGGGCCGGGAACTCGTTTGTTACATTTCTGTCCGGTGTGGTGCCTCATGTTATGCTGGGATACACAATTGTGGTGGCAATTCTTGCGTACTTCTTGCTCTTCAGTGGCTTCTTCATCAACAGGGATAGGATTCCAAGTTACTGGATTTGGTTCCATTACATGTCACTTGTGAAGTACCCTTACGAGGCTGTTCTGCAGAACGAGTTTGAGGACCCTGTCAAGTGCTTCGTTAGAGGCGTGCAGATCTTTGATAACACGCCGCTTGGGTCGGTGCCGGAGGCCTTGAAGTTGAAGCTCTTGGATAGCATGAGCAACACCCTTGGGATGAAGATCACTTCGTCCACGTGCTTGACCACTGGTGCTGACATTTTGCAGCAGAATGGAGTCACGGATTTGAGCAAGTGGAACTGCTTGTGGGTCACTGTGGCTTGGGGTTTCTTGTTCAGGTTTCTATTCTACTTGTCCTTGTTGGTGGGAAGCAAGAACAAGAGGAGGTGA 2292 0.5288 MSSRVVADNALPVTNTTPYFGMTELDDYTRRSAAIGGSPTLGQLLKHVGDVRKEVVGDGSETPVHQALEIGDDGVGIEPRSLPFVLSFNNLTYSVKVRRKLTFSAILPRRRSRLGAAADSEAPAVGDRMFSRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGRLKGTVALNGEALDSRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKARVQALIDQLGIRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPAQLPSFFAEFGHPIPDAENRTEFALDLIRDLEGSPGGTKSLVEFNKSWQSMKHPAPAAHSNNTVNDQNGMSLKEAISASISRGKLVSGASATNTNSSNPSSMVPTFANPIWMEMATLSKRSFLNSRRMPELFGIRLGAVMVTGFILATMFWKLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLVSHALVSLPSLLFLSLAFSSITFWAVGLDGGISGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYMSLVKYPYEAVLQNEFEDPVKCFVRGVQIFDNTPLGSVPEALKLKLLDSMSNTLGMKITSSTCLTTGADILQQNGVTDLSKWNCLWVTVAWGFLFRFLFYLSLLVGSKNKRR* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2932 763 Pfam ABC transporter 137 289 IPR003439 GO:0005524
Ahy19g2932 763 Pfam ABC-2 type transporter 460 667 IPR013525 GO:0016020|GO:0140359
Ahy19g2932 763 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 32 756 - -
Ahy19g2932 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 352 IPR027417 -
Ahy19g2932 763 ProSitePatterns ABC transporters family signature. 261 275 IPR017871 GO:0005524
Ahy19g2932 763 Pfam ABC-2 type transporter 318 378 IPR043926 GO:0140359
Ahy19g2932 763 SMART AAA_5 146 338 IPR003593 -
Ahy19g2932 763 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 32 756 - -
Ahy19g2932 763 Gene3D - 128 352 IPR027417 -
Ahy19g2932 763 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 120 361 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2932 Ahy-Chr19 152066529 152069467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2932 136 321 Calmodulin-binding Proteins AT2G36910 30.688 2.81e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2932 K05681 - gmx:100803658 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2932 19 152066529 152069467 Ahy19g2932 19 152066529 152069467 ECH
Ahy19g2932 19 152066529 152069467 Ahy9g2689 9 115762560 115765686 hybridization