LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy19g2924	ATGTGGATTTTAGGTGCAGATAAGAGTGTTATTACTATCATGTGTCTCCACATCTTATGTTTATTATTACTTCTATTGAAAGTAAATGCAAAAGAAGAATCATATGAATCTGATGATAGAGTCATAAATCTTCCTGGCCAGCCTTCAAGCCCATCAGTTTCACACTTCTCAGGTTATATCACTGTCAATGAAGATCATGGGAGGGCCCTCTTCTACTGGTTCTTTGAAGCTCAATCTGAACCTTCCAATAAGCCCCTCCTTCTTTGGCTCAATGGAGGACCTGGATGTTCCTCCATTGGTTATGGTGCAGTTGTTGAGGTAGGACCTCTTATCATCAACCAAAATGGTGATGGTCTGCATTTCAACACATATTCTTGGTATCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCTGTTGGAGTTGGTTTTTCTTACAGCAATACAACTTCTGATTATCTCACCATTTTAGAGGATAATCTTGTGGCTGAGGATTCCTACAATTTCTTGGTGAATTGGCTGCAACAATTCCCACAATTCAAATCCAGGGACTTTTTCATAGCTGGAGAAAGCTATGGTGGGCACTATATCCCCCAACTCGCAGAGCTAGTCTTCGATCGGAACAAAGATAAAAGCAAATACCCTTTTATTAATCTTAAAGGTTTTATTGTAGGGAATCCAAAAACTGATGATTACTATGATAATAAAGGCCTTGTGGAATATGCATGGAGCCATGCAGTTATATCAGACCAACAATATGACAAAGCAAAACAAGTTTGTGATTTTAAGAAATCTGAATGGTCTAATGAATGTAACATTGCCATGAATGAAATCTTCCGAGATTACTCAGAGATTGACATATACAACATTTATGCTCCGTCGTGTCGACTTAATAACTCATCGGACAATAATCATGGCCGGGAACCACTCACAAAGATGATGAGAATTGGAAATAATAATTATAAAGTAAAGAGGATGAGAATTTATTTTGAAGGCTATGATCCATGCTATTCCACATATGCAGAGGAATATTTCAATAGGGTGGATGTTCAATCATCTTTTCATGCAAATATTAGAGGAAATACTAATAATGCAGCATGGAAAGTTTGCAATAATTCCATATTGAGGAGTTACAATTTTTCTGTATTTTCGGTCCTACCAATCTACACAAAACTCATCAAGGGTGGCCTTAAAATATGGATTTACAGTGGAGACACAGATGGGAGAATACCAGTGATAGGGACACGGTATTGGGTTGAAGCTCTGGGATTATCTCTAAAGTCTAGTTGGCAGAATTGGTACCATGACAATCAGGTTGGTGGAAGGATAGTGGAATATGAAGGGCTAACATACGTGACAGTGAGAGGGGCAGGTCACTTGGTACCATTAAACAAACCAAGTGAGGCTCTCTCCCTCATTCATTCTTTCCTTTCAGGCCAACATCTCCCTACTTATCACAAATAA	1461	0.3854	MWILGADKSVITIMCLHILCLLLLLLKVNAKEESYESDDRVINLPGQPSSPSVSHFSGYITVNEDHGRALFYWFFEAQSEPSNKPLLLWLNGGPGCSSIGYGAVVEVGPLIINQNGDGLHFNTYSWYQEANLLFVESPVGVGFSYSNTTSDYLTILEDNLVAEDSYNFLVNWLQQFPQFKSRDFFIAGESYGGHYIPQLAELVFDRNKDKSKYPFINLKGFIVGNPKTDDYYDNKGLVEYAWSHAVISDQQYDKAKQVCDFKKSEWSNECNIAMNEIFRDYSEIDIYNIYAPSCRLNNSSDNNHGREPLTKMMRIGNNNYKVKRMRIYFEGYDPCYSTYAEEYFNRVDVQSSFHANIRGNTNNAAWKVCNNSILRSYNFSVFSVLPIYTKLIKGGLKIWIYSGDTDGRIPVIGTRYWVEALGLSLKSSWQNWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHSFLSGQHLPTYHK*	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy19g2924	486	ProSitePatterns	Serine carboxypeptidases, serine active site.	186	193	IPR018202	GO:0004185
	Ahy19g2924	486	Pfam	Serine carboxypeptidase	45	478	IPR001563	GO:0004185\|GO:0006508
	Ahy19g2924	486	Gene3D	-	384	478	-	-
	Ahy19g2924	486	PRINTS	Carboxypeptidase C serine protease (S10) family signature	172	197	IPR001563	GO:0004185\|GO:0006508
	Ahy19g2924	486	PRINTS	Carboxypeptidase C serine protease (S10) family signature	448	461	IPR001563	GO:0004185\|GO:0006508
	Ahy19g2924	486	PRINTS	Carboxypeptidase C serine protease (S10) family signature	122	134	IPR001563	GO:0004185\|GO:0006508
	Ahy19g2924	486	PRINTS	Carboxypeptidase C serine protease (S10) family signature	135	145	IPR001563	GO:0004185\|GO:0006508
	Ahy19g2924	486	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	13	483	IPR001563	GO:0004185\|GO:0006508
	Ahy19g2924	486	Gene3D	-	335	373	-	-
	Ahy19g2924	486	Gene3D	alpha/beta hydrolase	33	305	IPR029058	-
	Ahy19g2924	486	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 26	13	483	-	-
	Ahy19g2924	486	ProSitePatterns	Serine carboxypeptidases, histidine active site.	448	465	IPR033124	GO:0004185
	Ahy19g2924	486	SUPERFAMILY	alpha/beta-Hydrolases	37	482	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy19g2924	Ahy-Chr19	151915605	151923383	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy19g2924	366	481	Calmodulin-binding Proteins	AT2G22960	31.624	2.01e-14	69.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy19g2924	K16297		-	gmx:100815141	783.867