Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2908 ATGGTTGTATCAGCTACGTTTAGGCGAATTGTCGCTCCTTGTTGGAGGCCATCTGATGTTCAGAATGGGAATGGGGATGCAAATGGTGAATATGATGGTTTGCTTTGGTACAAAGATTCAGGAAGACATGCTAATGGGGAATTCTCCATGGCAGTTATTCAGGCAAACAATTTGTTGGAGGATCAAAGCCAACTTGAATCAGGCCCCATAAGCTCGCTCACAACGAATCCTCATGGAACTTTTGTTGGTATCTATGATGGCCATGGAGGTCCAGAAGCTGCCCAGTTCGTGAACGAACGTCTGTTTAAAAATGTTAAGAAATTTACCTCAGAAAATCATGGAATGTCGGCTGACGTTATCAATAAAGCATTCTTGGCAACAGAAGAGGAATTTCTGTCTGTTGTAAGGAAGCAGTGGCAAATCAAGCCGCAGCTAGCCTCTGTTGGATCCTGTTGTTTGATTGGCATAATATGTAGCGGGGTGCTCTATGTTGCAAATGCAGGAGACTCTAGAGCAGTGTTAGCTAGGGTGGATGAGGCTACGAAAGATATTAAAGCTATTCAGTTATCCTCTGAGCACAATGCTAGCTGCGAATCTGTCAGAGACGAGTTGCGCTCGTTGCATCCTGATGATCCACAGATTGTAGTTATGAAGCACCAGGTCTGGCGTGTGAAGGGTCTGATTCAGATTTCAAGATCCATTGGCGACGCCTATCTAAAAAAGGCAGAGTTTAACAAACCACCATTGTTGCCAAAATTTAGGCTTGCTCAACCCTTTGAGGAGCCAATCCTTAAAGCCGAACCAGCAGTAACAGTGCAAAAACTCGAACCGGGAGATCAGTTTCTTATATTTGCTTCAGACGGATTATGGGAGCATATGAGCAATCAAGAAGCAGTTAACATTGTCCAGAGCTGTCCGCGCAATGGAGTAGCAAGGAGACTCATCAAAACAGCACTTTGTGAAGCTGCAAAGAAGAGAGAAATGAGATACTCAGACTTGCAGAAGATTGAGAGAGGGGTGAGGAGACATTTCCACGACGACATCACAGTCATAGTTTTGTTCCTTGATTCCCATTTAATAAGCCGTGATAATTGGAGCAGCCCTATGGTTTCAGTCAGAGGTGGTGGTTATAGTGGTAGTGGTCTTATTGGTCTTGGTCTTGTAGATGGCTAG 1173 0.4442 MVVSATFRRIVAPCWRPSDVQNGNGDANGEYDGLLWYKDSGRHANGEFSMAVIQANNLLEDQSQLESGPISSLTTNPHGTFVGIYDGHGGPEAAQFVNERLFKNVKKFTSENHGMSADVINKAFLATEEEFLSVVRKQWQIKPQLASVGSCCLIGIICSGVLYVANAGDSRAVLARVDEATKDIKAIQLSSEHNASCESVRDELRSLHPDDPQIVVMKHQVWRVKGLIQISRSIGDAYLKKAEFNKPPLLPKFRLAQPFEEPILKAEPAVTVQKLEPGDQFLIFASDGLWEHMSNQEAVNIVQSCPRNGVARRLIKTALCEAAKKREMRYSDLQKIERGVRRHFHDDITVIVLFLDSHLISRDNWSSPMVSVRGGGYSGSGLIGLGLVDG* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2908 390 SUPERFAMILY PP2C-like 73 356 IPR036457 -
Ahy19g2908 390 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Ahy19g2908 390 SMART PP2C_4 39 353 IPR001932 -
Ahy19g2908 390 ProSiteProfiles PPM-type phosphatase domain profile. 55 355 IPR001932 -
Ahy19g2908 390 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 9 377 - -
Ahy19g2908 390 PANTHER ALPHABET, ISOFORM E-RELATED 9 377 - -
Ahy19g2908 390 CDD PP2Cc 48 355 IPR001932 -
Ahy19g2908 390 Gene3D - 37 364 IPR036457 -
Ahy19g2908 390 Pfam Protein phosphatase 2C 70 325 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2908 Ahy-Chr19 151771534 151774809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2908 1 376 PP2C-type Phosphatase Gene Family AT3G12620 74.074 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2908 K01102 - tcc:18586300 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2908 19 151771534 151774809 Ahy19g2908 19 151771534 151774809 ECH
Ahy19g2908 19 151771534 151774809 Ahy9g2711 9 115962900 115966132 hybridization