Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2893 ATGCGTCGGTGGCTGTGTTGCACGTGTCAGGTAGAAGAGTCTTACCCATCGCATGAAAGTGAGCACCTGAAAAGCCCAAGGAATTATGGAGATGGCAACCAAAAAGGTTCAAAGGCGTCAGCTCCCGTCAAATCAGAACCACATAAGGCACCACCGCCTATTGAGGTTCCGGCATTATCTTTAGAGGAGCTGAAGGAGAAGACTGAGAATTTTGGATCAAAGGCATTGATTGGTGAAGGATCATATGGAAGAGTGTATTATGCAACCTTAAATGATGGGAAAACAGTGGCTGTGAAAAAGCTTGATGTTTCATCTGAACCTGAAACAAATAATGAGTTTTTGACCCAGGTTTCTATGGTTTCAAGGCTGAAGAACGATAATTTTGTTGAGCTGCAAGGGTATTGTGTTGAAGGAAATCTTCGGTTACTTGCGTATGAGTATGCTACTATGGGCTCTCTTCATGACATATTGCACGGTAGAAAGGGAGTTCAAGGGGCACAACCAGGGCCAACTCTTGATTGGATACAGCGAGTTAGAATTGCAGTTGACGCAGCAAGGGGATTAGAATATTTGCATGAGAAAGTTCAACCCGCTATTATACACAGAGATATCAGATCAAGCAATGTGCTCATCTTTGAAGATTTTAAGGCTAAGATAGCTGATTTTAACCTTTCAAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCTACTCGAGTGTTGGGAACTTTTGGTTATCATGCTCCAGAGTATGCAATGACTGGCCAGTTGACTCAAAAAAGTGATGTCTACAGTTTTGGCGTTGTTCTTCTAGAACTTCTTACTGGAAGAAAACCTGTTGATCATACCATGCCCCGCGGACAGCAAAGTCTTGTTACATGGGCTACCCCAAGATTAAGTGAAGATAAAGTTAAACAATGTGTTGACCCAAAACTGAAAGGAGATTATCCCCCTAAAGGAGTTGCCAAGCTTGCAGCCGTTGCGGCCCTGTGCGTGCAATATGAAGCCGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTCAAGACTCCTGCTCCTGCTGCGCCTGAAAGTTGA 1092 0.4405 MRRWLCCTCQVEESYPSHESEHLKSPRNYGDGNQKGSKASAPVKSEPHKAPPPIEVPALSLEELKEKTENFGSKALIGEGSYGRVYYATLNDGKTVAVKKLDVSSEPETNNEFLTQVSMVSRLKNDNFVELQGYCVEGNLRLLAYEYATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPAIIHRDIRSSNVLIFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGDYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKTPAPAAPES* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2893 363 SUPERFAMILY Protein kinase-like (PK-like) 49 349 IPR011009 -
Ahy19g2893 363 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 362 - -
Ahy19g2893 363 Gene3D Transferase(Phosphotransferase) domain 1 149 358 - -
Ahy19g2893 363 Pfam Protein tyrosine and serine/threonine kinase 76 349 IPR001245 GO:0004672|GO:0006468
Ahy19g2893 363 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 1 362 - -
Ahy19g2893 363 Gene3D Phosphorylase Kinase; domain 1 43 147 - -
Ahy19g2893 363 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Ahy19g2893 363 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Ahy19g2893 363 PIRSF ILK 12 357 - -
Ahy19g2893 363 ProSiteProfiles Protein kinase domain profile. 71 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g2893 363 MobiDBLite consensus disorder prediction 14 54 - -
Ahy19g2893 363 SMART tyrkin_6 71 349 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2893 Ahy-Chr19 151493677 151498246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2893 5 350 Receptor kinase-like Gene Family AT4G02010 47.278 1.18e-95 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Ahy19g2893 PK_Tyr_Ser-Thr 3.60E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2893 K13436 - gmx:100790016 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2893 19 151493677 151498246 Ahy9g2723 9 116128787 116133029 hybridization