Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2877 ATGGGTGGAAAACGAGTCACCAATAAGCGGCAACGCGACGCCGCCGCCGACCAGCTTCGCACTGTCAAGAGAGAACGCGTCGCCGCTGCTGAGGGCGCCGACGAGGCCGAGTCCCCTCAGAAACAAGATCCGGCAAGTCGCCGGTTCATACGCTCCGAGTTTTTCAAACTCAAAACTCTCATTAGTGAGAAAAAGGACGATTTGATGAACACCGATTCCGACAAGTTCGATTCCATCTTGAATGAGTTCCACAAGCTCCACGATCAAGTCCAGAAGCCGAGAGAGCAGGTTGCAGATGCAGAGGCGCTGCTGGAGTTGACTAACAGTTTGGTGATGTCAGTGAGGTCTATGGTGAATGACAATATTACCCCTGCTGAATTTGTTGGCTGTTTGATCAAGGAATATGGCCAACCATCCATCCAAGACCCGGAGTGCAACTCGATCGACTGGAAAAAACTTGGTCTTGCTGTGTCCCCCATGTTTATGAAGGTTCAGGGTTGTTGCACCATGCTTGGTCCCATGGAGAGGGAGTTGAAGCAACGCAAGATCGGAGTTCAGAGACAAAGAACAAAGCCAACATCTGAAAGGGCTAGGCCTCAAGAGGTTGTCCAGCCCCAAGAAAAGGAAAGATCTGATACTGATCAAAACATGAAAGTAATGTTTGACATCTTGGCGAAAATGAGACGCGTTCAACTTGAATGTCTAATTCTGAACAGAACATCATTTGCTCAGACTGTTGAAAACTTGTTTAGCCTATCATTTTTAGTCAAAGATGGTCGGGCTCAGATCACTGTGGATGAAAACCGCATACACTACGTTTTGCCTAGGAATGCTCCATCAGGTGATTCTCTGAGAGCTAAAGAAGCCACTTTCACTCATTTCATGTTCAGACTTGATTTCCAAGATTGGAAGTTAATGAAGGATATGGTGCCTGAGGGCAAGGAGTTAATGCCTCATAGGACTCAGTTTTGCACTGTTGTTGGTTCTCAACCACAGATGGGTTCTGATGATGGTTCCCCACATCCTCTAACTGTCACACCTATCAGGAAATTTTCTCGGAACCGAGGGCTGGTTGTGCAGGAGGAAGGTGTGGTAGAGGAATCTCCTGAATGTGATGATGAAAAATCTTCCAGAGCAGCTGCCATCAGAACGTGTAAGCGTAAGCTTACATAA 1173 0.4723 MGGKRVTNKRQRDAAADQLRTVKRERVAAAEGADEAESPQKQDPASRRFIRSEFFKLKTLISEKKDDLMNTDSDKFDSILNEFHKLHDQVQKPREQVADAEALLELTNSLVMSVRSMVNDNITPAEFVGCLIKEYGQPSIQDPECNSIDWKKLGLAVSPMFMKVQGCCTMLGPMERELKQRKIGVQRQRTKPTSERARPQEVVQPQEKERSDTDQNMKVMFDILAKMRRVQLECLILNRTSFAQTVENLFSLSFLVKDGRAQITVDENRIHYVLPRNAPSGDSLRAKEATFTHFMFRLDFQDWKLMKDMVPEGKELMPHRTQFCTVVGSQPQMGSDDGSPHPLTVTPIRKFSRNRGLVVQEEGVVEESPECDDEKSSRAAAIRTCKRKLT* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2877 390 PANTHER UNCHARACTERIZED 20 373 IPR027786 GO:0005634|GO:0006281|GO:0030915
Ahy19g2877 390 Pfam Nse4 C-terminal 230 314 IPR014854 -
Ahy19g2877 390 MobiDBLite consensus disorder prediction 366 390 - -
Ahy19g2877 390 MobiDBLite consensus disorder prediction 180 214 - -
Ahy19g2877 390 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 20 373 - -
Ahy19g2877 390 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2877 Ahy-Chr19 151261363 151264053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2877 9 390 Non-SMC Element family AT1G51130 47.837 2.47e-118 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2877 K22825 - gmx:100792117 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2877 19 151261363 151264053 Ahy9g2738 9 116264542 116267157 hybridization