Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2857 ATGGGATCATGCGTGTCAATAACGGTGGAAGCAGGGCCTTGTGCTCCGATCTCTGAATCGAATGGGAATGAGAATGGCAGAGGAAATGGGAATGAGAAGCGGCGACAGAGGAGGAGGAGGACACAATTACAGCGACAACCACAACCGCATTCAAGCTCAGTTCACCGCGGTTGTTCTTCCTCGTCCGCTGCCTTCGATTACAGGGTGGATGAAGATAGCTTGCATAGAATTCCCGGAAGAATCTTTCTCAATGGATCCACCCGCATTGCTTCCCTGTATTGTAAGCAAGGTAGAAAAGGCCAGAACCAAGATGCTATGCTTCTTTGGGAGAACGTTTGCTCAAAAGAGGACACTGTTTTTTGTGGTGTGTTTGATGGGCATGGACCTCATGGGCATAGGGTTGCAAAGAAAGTGAGGGATTCCTTCCCTCTAATACTTATGGCTGAATGGGATTTGCATCTCCATAACAATAAAGATGGACTCTGCAGCAGTTCTGCAGCTGAAGAGAAACCCAACCTAGAGAGGCATGACACAAATGCTTTGGAGGCAGTTAGAGAATCTTATGTGAAGGCTTGTAAGCTTATGGACAAAGAAATCAACATGCAGAATGATTTTGACTGCTATTGCAGTGGGACTACAGCAGTTACCGTGGTTAAGCAGGGACAGCACCTTGTAATTGGGAATGTTGGGGACTCGAGAGCTGTGTTGTGTACCCGAGATCACGACGATTCTCTTGTTCCTGTTCAGTTAACAACTGACTTTAAGCCAAGTCTTCCAAGGGAAGCAGAGAGGATAAAGCTTTCTAAGGGAAGGGTGTTTGGCCTTCCGAATGAACCAGAGGTAGCTCGAGTATGGCTGCCTAACATCGATTCACCAGGGCTTGCTATGTCGCGAGCTTTCGGAGATTTTTGCCTCAAGGACTTTGGCCTCATCTCTCTTCCTGATGTCTCCTATCATCACATTTCTGACAAGGATGAATTTGTGGTATTAGCTACTGATGGGATTTGGGATGTGTTATCAAACAGAGAAGTACTGGGCATTGTGGGCAGCGTGCCACGATCATGTGCAGCTCGAATCGTCGTGGACTCAGCTGTTCATGCATGGAGGACTAAGTTCCCCGCTGCCAAGATTGATGATTGTTCTGTCGTGTGCCTCTTCTTTGATTCAGATTCAGATCAAGGTAAGTCACCATCCTCTGCAGAAGACATGATGATGATGATGATGATGATGGATGAGCAATCTGAGGTTGGAACTGTTTTATCTGCCACTAACACTATAGTTGGCCCAATGCAACCATTGAGATCAAGAACCAACACCACATCTAAGTAA 1329 0.4658 MGSCVSITVEAGPCAPISESNGNENGRGNGNEKRRQRRRRTQLQRQPQPHSSSVHRGCSSSSAAFDYRVDEDSLHRIPGRIFLNGSTRIASLYCKQGRKGQNQDAMLLWENVCSKEDTVFCGVFDGHGPHGHRVAKKVRDSFPLILMAEWDLHLHNNKDGLCSSSAAEEKPNLERHDTNALEAVRESYVKACKLMDKEINMQNDFDCYCSGTTAVTVVKQGQHLVIGNVGDSRAVLCTRDHDDSLVPVQLTTDFKPSLPREAERIKLSKGRVFGLPNEPEVARVWLPNIDSPGLAMSRAFGDFCLKDFGLISLPDVSYHHISDKDEFVVLATDGIWDVLSNREVLGIVGSVPRSCAARIVVDSAVHAWRTKFPAAKIDDCSVVCLFFDSDSDQGKSPSSAEDMMMMMMMMDEQSEVGTVLSATNTIVGPMQPLRSRTNTTSK* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2857 442 Gene3D - 85 389 IPR036457 -
Ahy19g2857 442 PANTHER ALPHABET, ISOFORM E-RELATED 72 394 - -
Ahy19g2857 442 SUPERFAMILY PP2C-like 85 388 IPR036457 -
Ahy19g2857 442 MobiDBLite consensus disorder prediction 45 59 - -
Ahy19g2857 442 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 72 394 - -
Ahy19g2857 442 Pfam Protein phosphatase 2C 95 349 IPR001932 -
Ahy19g2857 442 CDD PP2Cc 88 387 IPR001932 -
Ahy19g2857 442 SMART PP2C_4 80 385 IPR001932 -
Ahy19g2857 442 ProSiteProfiles PPM-type phosphatase domain profile. 89 387 IPR001932 -
Ahy19g2857 442 MobiDBLite consensus disorder prediction 15 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2857 Ahy-Chr19 150926911 150929684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2857 74 394 PP2C-type Phosphatase Gene Family AT1G16220 54.328 9.60e-132 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2857 - - gmx:100802479 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2857 19 150926911 150929684 Ahy9g2755 9 116493398 116496164 hybridization