Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2854 ATGGCAGCTACATTCACCATCACAACAACAGCGGCAGCAACTCTCTCAAATGTTTCAGGAAACAGGAGCAGAATCAGAGGTTTGAACCCTAACCCTAACCTTAACGCAATCAGCACCAGTTCCAGTTGCAGTGCGATTGCTACTTCATCGAAGCACAGGCTCCTCGGGGGGATTCTTCATCCGCGACTGAATGCGATTCCGCTCGTAAGAACCACGAGGCAAAGGGGTTTTGTGCGGGCGAGTTCGGAGGATGCACCACTACAGTCCAAAGTAACTCACAAGGTGTTCTTCGACATCAGCATTGGAAACCCCGTTGGGAAGCTTGCTGGGAGGATTGTGATTGGACTGTTCGGTGACGATGTTCCTCAAACTGCAGAGAATTTCCGCGCCCTCTGCACTGGAGAGAAGGGTTTTGGATATAAGGGCTCCACCTTCCACCGTGTAATCAAGGATTTCATGATTCAAGGAGGAGACTTTGACAAAGGAAATGGAACTGGAGGCAAAAGTATATACGGGCGCACCTTCAAAGATGAGAATTTTAAACTCTCTCATACTGGACCTGGAGTTGTGAGCATGGCAAATGCAGGCCCCAACACAAATGGAAGTCAGTTTTTCATTTGCACGGTGAAGACACCATGGCTGGATCAGAGACATGTTGTATTTGGCCAAGTTTTGGAAGGCATGGACATTGTTAGGCTGATTGAGTCGCAGGAGACAGATCGGGGAGACCGTCCAAGAAAGAAGGTTACCATCAGTGACTCTGGTGAGCTTCCAATTGCTTGA 783 0.4879 MAATFTITTTAAATLSNVSGNRSRIRGLNPNPNLNAISTSSSCSAIATSSKHRLLGGILHPRLNAIPLVRTTRQRGFVRASSEDAPLQSKVTHKVFFDISIGNPVGKLAGRIVIGLFGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQETDRGDRPRKKVTISDSGELPIA* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2854 260 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 109 253 IPR002130 GO:0000413|GO:0003755
Ahy19g2854 260 MobiDBLite consensus disorder prediction 236 260 - -
Ahy19g2854 260 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 140 157 IPR020892 GO:0003755|GO:0006457
Ahy19g2854 260 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 5, CHLOROPLASTIC 67 257 - -
Ahy19g2854 260 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 96 256 IPR002130 GO:0000413|GO:0003755
Ahy19g2854 260 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 67 257 - -
Ahy19g2854 260 MobiDBLite consensus disorder prediction 236 251 - -
Ahy19g2854 260 CDD cyclophilin_ABH_like 93 255 - -
Ahy19g2854 260 SUPERFAMILY Cyclophilin-like 87 257 IPR029000 -
Ahy19g2854 260 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 188 203 IPR002130 GO:0000413|GO:0003755
Ahy19g2854 260 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 216 231 IPR002130 GO:0000413|GO:0003755
Ahy19g2854 260 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 203 215 IPR002130 GO:0000413|GO:0003755
Ahy19g2854 260 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 116 131 IPR002130 GO:0000413|GO:0003755
Ahy19g2854 260 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 145 157 IPR002130 GO:0000413|GO:0003755
Ahy19g2854 260 Gene3D - 80 259 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2854 Ahy-Chr19 150859728 150862622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2854 110 251 U-box Gene Family AT5G67530 48.951 6.20e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2854 K03768 - zju:107417611 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2854 19 150859728 150862622 Ahy9g2758 9 116515691 116518793 hybridization