Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2841 ATGGAGAGTTTCTGGAGCATGTTTTGTGGGGAATCTGGTTGTTCAGGAAATCCTTATTGCAGTTATGATTTCAAGTTTTTGAAGGATCCTTCCTCATGTATCAACCATTTTCTGATCTTATGCATTCATGTGTTGCTTCTCATCATGATCTCATCAATCACCATGTTTCACAAGCCCTCTCCACTGAAAAAACAGCATCATCATGGACAAAGCTATTCAAGATTGCAGCTAGTTTCTGCCATAGCCAATGGCTCTTTGGGCTTGGTACATTTGATCTCAGGATTCTGGTTCCTAGAAGAGAATCTGAGAAAAACCAGAACTGTTTTCCCTCTTGATTGGTGGTTTCTTGAATTCATTCAAGGGTTGTCATGGTTGTTTGTAGGATTAACAATGAGTCTTAGGGTGAAACAACTTCCAAGAACATGGTTAAGGCTGATTTCTGTTCTTATTTTCTTGATTTCTGGAATTCTTTGTGCTTTGTCCTTGTTCTATGCAGTTAGTAGCAGAGGAATTTCCCTGAAAGTTGTTTTGGATGTTCTATCTTTTGGCGGCGCAATTTCATTGCTACTATGCAGTTACAAGGAATCTAAGCATAGAGACTTTGAAGGAGAAGAAAATTATGAAAGCCTTTACATGCCTTTAAATGATGAATCCATGTCCAACTCAATTGATTCTGATTCTGTTAGCTCTGTCACACTATTTTCTGGAGCCGGAATCTTCAGTTGGATGTCATTTTGGTGGTTGAATCCATTGATGAAAAGAGGAAAACAGAAAACACTTCAGGAACAAGACATTCCCAAGCTCCGTGAGGCCGACCGAGCCGAAAGCTGTTACTTTCAGTTCCAAGAACAATTGAACAAGCAGAAGATGAAAGAACAATCAGCACAGCAGCCATCACTCTTGAAAACAATAATTATGTGCCATTGGAAAGAGATTCTGATCTCAGGATTCTTTGCATTGCTGAAGGTGATAACTCTCTCTTGTGGACCTCTGCTTCTAAATTCCTTTATACTTGTTGCTGAGGGTAATGAGAGTTTCAAATATGAAGGTTATGTATTGGCCATATCATTGGTCATTACAAAGATCATAGAATCTTTATCCCAAAGGCAATGGTACTTCAGAACAAGACTAATTGGTTTGAAAGTTAGATCACTGCTTATTGCAGCTATTTATCAGAAGCAACTAAGACTATCCAATGCTGCTAGATTGGTGCATTCTGGTGGTGAGATCATGAATTATGTGAATGTGGATGCTTATAGAATTGGAGAATTTCCCTATTGGTTTCACCAGACATGGACCACCAGTGTTCAGCTTTGTATCGCCTTAGTAGTACTTTTTCGCGCCGTTGGGCTCGCCACATTCGCTTCCTTGGCAGTGATACTTCTCACCGTGCTTTGCAACACTCCACTTGCAAAGTTACAGCACAAGTTCCAGAGGAAACTTATGGTGGCGCAAGACGAGAGATTGAAGGCTACTTCTGAGGCTCTTGTGAATATGAAGGTGCTGAAGCTATATGCCTGGGAAACCAATTTCAGAAATGCCATTGAAAGATTGAGGAATGTTGAGCTCAAAAGACTTTCTGTAGTGCAATTGAGGAAAGCATATAGCAACTTTCTCTTTTGGGCCTCACCTGTTTTGGTATCTGCTGCATCCTTTGGAGCATGCTACCTTCTTGGTGTTCCTCTACATGCCAACAATGTTTTCACTTTCGTCGCGACTCTGCGCCTCGTTCAAGATCCTATTAGAACCATCCCTGATGTTATTGGGGTGGTGATCCAAGCAAAAGTTGCATTCTCAAGGATTTTGAAATTCCTTGAGGCACCTGAACTAGACAACCAAAGTTTCAGGAAGAAGCATTTTAGCGAAAACATGAGAGGTTCGATTTCAATAAAGTCTGCTGAGTTTTCATGGGAAGGTAATGGATCAAAACCAACTCTGAAGAACATAAATTTGGAGGTTAGAGCAGGGCAAAATGTGGCTATCTGTGGAGAAGTTGGCTCTGGAAAATCAACCCTCTTAGCTGCAATTCTCAGAGAAGTTCCCATTACTCACGGAACTATTGAAGTTTATGGAAAGTTTGCCTATGTTTCTCAAACTGCATGGATACAGACAGGTACAATAAGGGATAACATATTGTTTGGATCAGCAATGGATGCTGAAAAGTATCAAGAAACACTTCACAGGTCTTCACTGATGAAGGACCTTGAGCTTTTTCCCCATGGTGATCTCACTGAGATAGGGGAAAGAGGGGTTAACCTGAGTGGAGGCCAGAAGCAACGGATTCAGCTCGCTCGCGCTCTTTACCAGAATGCTGATATATACCTCTTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCCACAAACTTATTCAATGATTACATCATGGAAGGACTTGCAGGGAAGACAGTCTTGCTTGTCACTCATCAAGTTGATTTTCTTCCAGCATTTGATTCTGTTTTGTTGATGGCAGAGGGGAAAATCCTACAAGCTGCTCCTTATCACCATCTCTTGAACTCAAGCAAAGAATTTCAGGATCTTGTCCAGGCTCACAAAGAAACCGCCGGATCGGACAGGCTCGTGGATGCTACTTCTTCTTCTAACAGACTTACACACAATCCTGGGGAGATAAGGAAAACATATGTAGAGAATCAGTTGGAAACTTCACGTGGCGAGCGCGATCAATTGATCAAGCAAGAAGAAAGAGAAGAAGGAGACAGGGGATTGAAGCCATACTTACAGTATCTGAATCAAAACAAAGGATATTTGTACTTCTCTGTGGCTGCACTTTCTCACCTCTCATTTGTGATTGGCCAGACATTGCAGAACTGGTGGATGGCTGATAAAGTTGATGATTCTAATGTCAGCACATTGCATCTGATTGTTGTCTACTTGTTGATTGGATTTGCTTCAACATTTTTCTTGTTGATTAGAAGCCTTGTAGCAGTTGCTTTGGGCCTTCAATCATCAAAATCTATGTTCTTACAGCTTTTGAATTCCCTCTTCCGCGCGCCGGTGTCCTTCTATGACTCCACACCATTAGGAAGAATTCTTAGTAGGGTCTCCTCTGATCTGAGCATTGTGGATCTTGATGTTCCATTTAGCCTTGTTTTCGCAGTGGGAGCTACTAACACTTGCTATGCCAATCTTATAGTCTTAGCAGTCATTACTTGGCAAGTGTTGTGTGTCTCTATACCAATGGTTTACATAGCAATTCGCTTGCAGAGCTACTACTTTGCCACTGCAAAAGAATTGATGCGGATGAATGGCACAACAAAATCCTATGTAGCTAATCATTTAGCCGAATCTGTTGCCGGGGCTGCGACGATAAGGGCTTTCGAGGAAGAACACAGGTTTTTCATGAAGAATCTTGATCTCATTGATGTGAATGCAAGCCCTTTCTTCCACAGCTTTGCAGCAAATGAGTGGCTGATGCTACGCTTAGAAACAATCAGTGCAGTTGTTTTTGCAGCCGCAGCACTTTCCATGGTGGTGCTTCCACCAGGGACTTTCACCTCAGGATTCATTGGCATGGCTCTATCATATGGACTTTCATTAAACTCGTCCCTAGTATTTGCAATTCAAAATCAATGCACTGTAGCAAACCAGATAATCTCAGTGGAGAGGCTAAACCAATACATGTATATAGCAAGCGAGGCACCAGAAGTTATACAAGAAAATCGTCCTCCTCCCAATTGGCCTATTAAGGGAAAAGTACAAATTCATAATTTGCAGATAAGATACAGGGAAAGTGCACCGCTTGTACTACGTGGAATCACGTGCACGTTTGAAGGAGGGCACAAGATTGGAATAGTTGGAAGAACAGGGAGTGGAAAATCTACATTAATAGGTGCATTGTTCCGGCTGGTGGAGCCAGCAGGTGGAAGGATCATAGTTGATGGGATTGATATTTCTTCAATTGGACTCCATGATTTGAGGTCACGTTTTGGTATCATACCTCAGGATCCTACTCTCTTCAATGGCACTGTTAGATACAATTTGGACCCTTTATCTCACCACTCTGATCATGATATTTGGCAGTGTTGGTTGCATGTGAAGGTTCTTGGAAAGTGCCAGTTGCTAGAAGTTGTGAAAGAGAAAGAAGGCGGCTTAGACTCTTCGGTTGTTGAAGCTGGGGCGAACTGGAGCATGGGACAACGGCAACTGTTCTGTTTGGGGCGTGCACTTCTGAGGAGAAGTAAGATTTTGGTGCTGGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTGCAGAAAACCATCAGAACCGAGTTTGCAGATTGTACTGTAATCACAGTTGCACATAGGATTCCAACTGTCATGGATTGCACCAAGGTCGCTGCTATCAGTGATGGAGAATTGGTTGAGTATGATGAGCCCATGAACTTGATGAAGCAAGAAGGATCATTGTTTGGACAACTTGTTAAGGAATATTGGTCTCATTTTCAGTCTGCAGAATCTCACTGA 4479 0.4204 MESFWSMFCGESGCSGNPYCSYDFKFLKDPSSCINHFLILCIHVLLLIMISSITMFHKPSPLKKQHHHGQSYSRLQLVSAIANGSLGLVHLISGFWFLEENLRKTRTVFPLDWWFLEFIQGLSWLFVGLTMSLRVKQLPRTWLRLISVLIFLISGILCALSLFYAVSSRGISLKVVLDVLSFGGAISLLLCSYKESKHRDFEGEENYESLYMPLNDESMSNSIDSDSVSSVTLFSGAGIFSWMSFWWLNPLMKRGKQKTLQEQDIPKLREADRAESCYFQFQEQLNKQKMKEQSAQQPSLLKTIIMCHWKEILISGFFALLKVITLSCGPLLLNSFILVAEGNESFKYEGYVLAISLVITKIIESLSQRQWYFRTRLIGLKVRSLLIAAIYQKQLRLSNAARLVHSGGEIMNYVNVDAYRIGEFPYWFHQTWTTSVQLCIALVVLFRAVGLATFASLAVILLTVLCNTPLAKLQHKFQRKLMVAQDERLKATSEALVNMKVLKLYAWETNFRNAIERLRNVELKRLSVVQLRKAYSNFLFWASPVLVSAASFGACYLLGVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFSRILKFLEAPELDNQSFRKKHFSENMRGSISIKSAEFSWEGNGSKPTLKNINLEVRAGQNVAICGEVGSGKSTLLAAILREVPITHGTIEVYGKFAYVSQTAWIQTGTIRDNILFGSAMDAEKYQETLHRSSLMKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNDYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMAEGKILQAAPYHHLLNSSKEFQDLVQAHKETAGSDRLVDATSSSNRLTHNPGEIRKTYVENQLETSRGERDQLIKQEEREEGDRGLKPYLQYLNQNKGYLYFSVAALSHLSFVIGQTLQNWWMADKVDDSNVSTLHLIVVYLLIGFASTFFLLIRSLVAVALGLQSSKSMFLQLLNSLFRAPVSFYDSTPLGRILSRVSSDLSIVDLDVPFSLVFAVGATNTCYANLIVLAVITWQVLCVSIPMVYIAIRLQSYYFATAKELMRMNGTTKSYVANHLAESVAGAATIRAFEEEHRFFMKNLDLIDVNASPFFHSFAANEWLMLRLETISAVVFAAAALSMVVLPPGTFTSGFIGMALSYGLSLNSSLVFAIQNQCTVANQIISVERLNQYMYIASEAPEVIQENRPPPNWPIKGKVQIHNLQIRYRESAPLVLRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGRIIVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSHHSDHDIWQCWLHVKVLGKCQLLEVVKEKEGGLDSSVVEAGANWSMGQRQLFCLGRALLRRSKILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVAAISDGELVEYDEPMNLMKQEGSLFGQLVKEYWSHFQSAESH* 1493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2841 1492 MobiDBLite consensus disorder prediction 885 904 - -
Ahy19g2841 1492 Pfam ABC transporter transmembrane region 935 1176 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g2841 1492 Pfam ABC transporter transmembrane region 312 568 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g2841 1492 Gene3D - 603 870 IPR027417 -
Ahy19g2841 1492 Pfam ABC transporter 646 780 IPR003439 GO:0005524
Ahy19g2841 1492 Gene3D - 1223 1481 IPR027417 -
Ahy19g2841 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1240 1480 IPR003439 GO:0005524
Ahy19g2841 1492 Pfam ABC transporter 1257 1411 IPR003439 GO:0005524
Ahy19g2841 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1229 1473 IPR027417 -
Ahy19g2841 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 630 851 IPR003439 GO:0005524
Ahy19g2841 1492 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 68 1492 - -
Ahy19g2841 1492 SMART AAA_5 1266 1457 IPR003593 -
Ahy19g2841 1492 SMART AAA_5 655 828 IPR003593 -
Ahy19g2841 1492 SUPERFAMILY ABC transporter transmembrane region 301 606 IPR036640 GO:0005524|GO:0016021
Ahy19g2841 1492 CDD ABCC_MRP_domain1 628 828 - -
Ahy19g2841 1492 Gene3D ABC transporter type 1, transmembrane domain 888 1221 IPR036640 GO:0005524|GO:0016021
Ahy19g2841 1492 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 936 1203 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g2841 1492 Gene3D ABC transporter type 1, transmembrane domain 301 602 IPR036640 GO:0005524|GO:0016021
Ahy19g2841 1492 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 68 1492 - -
Ahy19g2841 1492 CDD ABCC_MRP_domain2 1238 1464 - -
Ahy19g2841 1492 CDD ABC_6TM_ABCC_D2 922 1215 IPR044726 GO:0140359
Ahy19g2841 1492 CDD ABC_6TM_ABCC_D1 314 601 IPR044746 GO:0140359
Ahy19g2841 1492 ProSitePatterns ABC transporters family signature. 753 767 IPR017871 GO:0005524
Ahy19g2841 1492 SUPERFAMILY ABC transporter transmembrane region 913 1223 IPR036640 GO:0005524|GO:0016021
Ahy19g2841 1492 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 313 593 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g2841 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 851 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2841 Ahy-Chr19 150663971 150670978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2841 622 882 Calmodulin-binding Proteins AT2G36910 27.778 1.56e-23 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2841 19 150663971 150670978 Ahy19g2841 19 150663971 150670978 ECH
Ahy19g2841 19 150663971 150670978 Ahy9g2767 9 116616909 116623419 hybridization
Ahy15g3625 15 158998606 159005443 Ahy19g2841 19 150663971 150670978 PCT
Ahy5g3212 5 114007266 114013960 Ahy19g2841 19 150663971 150670978 PCT
Ahy19g2841 19 150663971 150670978 Ahy15g3625 15 158998606 159005443 PCT
Ahy19g2841 19 150663971 150670978 Ahy5g3212 5 114007266 114013960 PCT