Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2824 ATGCCATTAACTCCGCCACCTCAGGCAACAACAGAAGAGGAGGAACAAGAAGAGAATAACAATAATGGATGCCACATGAACCTTGCTATTTCCCATCACTGCACTGGGGAGCCACAAGCCAATTTGAGTGCCGTCATTAATCACTATTTCCACACTGTAAATCACTTCAACTTGCGCAACTTGGGCTACCCCGGTAATCAGAATTTCAACTACGATGCGTTGGTACCATTGCTACAATTTCATCTAAACAATGCAGGTGATGCATTTGTTGGGACCGGCTGCTCTCTAAATTCAACATCGTTTGAAGTTAGTGTTCTTGATTGGTTTGCTAATTTGTGGAACATACAAAAAGATAAGTATTGGGGATGCATTACTACTGGTGGAACTGAAGCCAATCTTCACGCCATTTTAGTAGGGAGAGAGCAATTTCCTGATGGGATTCTATATACTTCCGAAGATTCACATTATTCAATATTTAAGATAGCAAGAATGTACCGAGTGCAATGTGTCAAAGTTAGAACTTTTGTCTCCGGTGAGATTGACTGTGCTGATCTAAAAGCTTCACTACTTCATCACAAGGACAAGCCAGCCATAATCAATCTTAACATAGGCACAACGATGAAAGGAGCTGTTGACGACGTTGATCTTGTAATAAAAACACTTGAGGAAACTGGTTTCAGTCGTGATAGATTCTACATCCACTGTGATGGAGCTCTATTTGGAATCATGCTCCCTTTTCTCAAAGCAGCACCGAAAGTAATAAGTTTCGAGAAACCCATTGGAAGTGTGAGTGTGTCTGGGCATAAATTCTTGGGATGTCCAATTCCCTGTGGAGTTGTAATAACCCGTTCTAAATACATGAATGCTTCATCAAGGGATGCAACAATCACAGGTAGTCGATGTGGACATGCTCCAATCTTCCTTTGGTATGCTATCAAAAAGAAAGGCTCAATAGGGATTCAAAACGAAGTGGAAAATTGCATAGCCAATGCACGTTACTTGCACAATCGACTAAGTGATGCTGGAATTGGTGCAATGTTAAATGAGCATAGCAACATTGTTGTGTTTGAGAGGCCTCTTGATCATCAATTTAGCCGTAGGTGGAGCTTGGCGTGCCAAGGAAACATTGCACACGTGGTGGTCATGCAGCATGTTACCATTCAAATGTTGGATTCTTTTGTTACTGAGTTTCTTCATAAACGATCATTTTCACGGTTCGAGGATTATGGCTCTTTTCAGCCTCTGTGCATAGCAGAAGAAGTTGGCGCTGCAAATTGTTCTTGCTCAATGCACAATTTGAAATCTTGA 1308 0.4144 MPLTPPPQATTEEEEQEENNNNGCHMNLAISHHCTGEPQANLSAVINHYFHTVNHFNLRNLGYPGNQNFNYDALVPLLQFHLNNAGDAFVGTGCSLNSTSFEVSVLDWFANLWNIQKDKYWGCITTGGTEANLHAILVGREQFPDGILYTSEDSHYSIFKIARMYRVQCVKVRTFVSGEIDCADLKASLLHHKDKPAIINLNIGTTMKGAVDDVDLVIKTLEETGFSRDRFYIHCDGALFGIMLPFLKAAPKVISFEKPIGSVSVSGHKFLGCPIPCGVVITRSKYMNASSRDATITGSRCGHAPIFLWYAIKKKGSIGIQNEVENCIANARYLHNRLSDAGIGAMLNEHSNIVVFERPLDHQFSRRWSLACQGNIAHVVVMQHVTIQMLDSFVTEFLHKRSFSRFEDYGSFQPLCIAEEVGAANCSCSMHNLKS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2824 435 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 262 283 IPR021115 GO:0016831
Ahy19g2824 435 PANTHER - 12 431 - -
Ahy19g2824 435 Gene3D - 80 312 IPR015421 GO:0003824
Ahy19g2824 435 Pfam Pyridoxal-dependent decarboxylase conserved domain 98 349 IPR002129 GO:0016830|GO:0019752|GO:0030170
Ahy19g2824 435 PANTHER SERINE DECARBOXYLASE 12 431 - -
Ahy19g2824 435 MobiDBLite consensus disorder prediction 1 21 - -
Ahy19g2824 435 SUPERFAMILY PLP-dependent transferases 57 397 IPR015424 -
Ahy19g2824 435 Gene3D Aspartate Aminotransferase, domain 1 313 401 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2824 Ahy-Chr19 150320445 150323043 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2824 122 342 Calmodulin-binding Proteins AT3G17760 25.703 3.65e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2824 K25193 - gmx:100781665 626.32