Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2821 ATGGAGAATTCAAGGCCCAATGACACACCACTTGTGACTTCCATTATTCATGCAGCCTCGTCGGAGTTGTCGCCAATCAGTAACGCCGGCAACGGACGACAAATAATGAAGCTTGTTATCAATGGCGACAGCCACACACAAGCTCATTTAGGTCAAGTAATTACCCACTACTTGGCCTCACTACAACCCCACAGGCAACGCTTTCTAGGGTACCCGACGAATGAGGAATTCAACTACGAGGCTCTGGCTCCGTTGCTTCATCTTCATCTTAACAATGCAGGGGATCCGTTTCATGGAAGCAGCTTCACTCTGAATTCAACAAGTTTCGAGGTGAGTGTGCTTGATTGGTTCGCTAATTTGTGGGACATAGAGAAGAATGAATATTGGGGATATGTCACCACTGGTGGTACTGAAGGCAATCTCCACGGCCTCTTACTTGGGAGAGAACAATTTCCGGATGGGATTCTATATGCCTCACAAGATTCCCATTATTCTGTATTTAAGATAGCGAGAATGTACAGAATGCAATGTATCAAGGTTTCAAGTTTGATCTCCGGTCAGATTGATTGCCATCATCTCAAGGCTTTGCTACTTGCTAACAAACACAAACCCGCCATTATCAATCTTAATATAGGGACAACAATGAAAGGAGCTGTTGATGATATTGATCTTGTAATAAAAACACTTCACGAAACTGGTTTTAGTCGTGATCGATTCTATATTCACTGTGATGGAGCTCTGTTTGGGATCATGCTCCCTTTTCTCAAATCAGGAGGACCAAAGATAACATTCAAGAAACCCATTGGAAGCATAACAATTTCTGGACACAAGTTCTTGGGATGCCCAATTCCTTGTGGCGTTGTAATAGCTCGTTTAAATTACATAAATGCCCTATCAAGAGACATAGGATACATTGCATCAAGGGATGCAACAATCACAGGTAGCCGCAGTGGCCATGCTCCAATCTTCCTTTGGTATAATCTGCAGAAAAAGGGCATAATGGGAATCAAGAATGAAGTTGAAAATTGCATAAGGAATGCACGTTACTTAAAGGATCAACTGGGAGATGCTGGAATTGGAGCAATGCTGAATGAGTTTAGTAACACGGTTGTGTTTGAGAAGCCTCTTGATGATGAGTTTGTGAGTAGGTGGAGTTTGGCTTGCAATGGAAACATCGCACATGTTGTTGTCATGCAACATGTTACCATTCAAATGTTGGATTCTTTTGTTGCTGAATTGGTTCACAACAGATCCATTTGGTTCCAACAAGATGGGATCAGAAAGTCTCTGTGCATTGCAGATGATGTTGGTGCTGTAAATTGTTCTTGCGCATTGCATAAGGCTAATATGGATATTCAATCCAACAACTATGCTCTGCAACAAATCAAACAAAATGTGTAG 1401 0.4204 MENSRPNDTPLVTSIIHAASSELSPISNAGNGRQIMKLVINGDSHTQAHLGQVITHYLASLQPHRQRFLGYPTNEEFNYEALAPLLHLHLNNAGDPFHGSSFTLNSTSFEVSVLDWFANLWDIEKNEYWGYVTTGGTEGNLHGLLLGREQFPDGILYASQDSHYSVFKIARMYRMQCIKVSSLISGQIDCHHLKALLLANKHKPAIINLNIGTTMKGAVDDIDLVIKTLHETGFSRDRFYIHCDGALFGIMLPFLKSGGPKITFKKPIGSITISGHKFLGCPIPCGVVIARLNYINALSRDIGYIASRDATITGSRSGHAPIFLWYNLQKKGIMGIKNEVENCIRNARYLKDQLGDAGIGAMLNEFSNTVVFEKPLDDEFVSRWSLACNGNIAHVVVMQHVTIQMLDSFVAELVHNRSIWFQQDGIRKSLCIADDVGAVNCSCALHKANMDIQSNNYALQQIKQNV* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2821 466 Gene3D - 87 328 IPR015421 GO:0003824
Ahy19g2821 466 SUPERFAMILY PLP-dependent transferases 52 414 IPR015424 -
Ahy19g2821 466 Pfam Pyridoxal-dependent decarboxylase conserved domain 107 358 IPR002129 GO:0016830|GO:0019752|GO:0030170
Ahy19g2821 466 Gene3D Aspartate Aminotransferase, domain 1 329 417 IPR015422 GO:0003824
Ahy19g2821 466 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 270 291 IPR021115 GO:0016831
Ahy19g2821 466 PANTHER - 44 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2821 Ahy-Chr19 150264278 150267782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2821 168 352 Calmodulin-binding Proteins AT1G65960 29.082 1.58e-09 57.8