Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2818 ATGTCTAATGAGGATTATGTAGATGAAACCAATAATGTTGACGGGTTTAACGGGAATTTGGAGAATCCCTTGAGAAACGGTGATGAGCTCCTGGACGACGATATCTTCATGGATGCTAACTTGGCAAATGCAGAAGTTGATGCTTCTGAACCCAATGAAGGTGCCCATTTTGATCAATTGGATGAATCTTATAAGATTGACGGTGATCTAGGAGTGGCTTTTGATTTCTACAATGCATTTGCCAAGTCAAGGGGATTTAGTGGTCGAAAAAGTAAGACGCGAAAGCATAATGGGATAATCAATCGACAGAATTTTGTTTGTTGTCGCGAGGGCTTCCGACAAAAAAAGGCAGATAATATGCATACCAGAAAACAAGAGCCTAGAGCTGAAACTAGATGTGGCTGTAAGGCAAAGGTTCAGGTGTCATTTGACGTTGTTAGTGGTCGCTGGATTGTTTCAAAATTTTCTGATTTGCATAATCACGACCTTCTTCCTCCAATTTTTACTGCAATGCTTCCTGGTCACAGGAAAATACCTGCTGCAGACATTGAGCAAATAAATATAATGAGGAAGGGTGGATTAGGCACTGCACATATTTTTGCAGCACTCTCAAGCCAATCTGGTGGTCACCACAATGTTCCCTTTTTGCCCAGGGACTTGTACAATCAAGTCGCACAGCAACGTCGACGGTTGAAGGGTGATGCTAGTGCGGCTCTTCAATTTTTGAGGAAGATGAAGTCCATTGATCCTGTCATGGTTATAAGATATGAGGTTGATAGGTTTCACTCGATAAAGAATTTATTTTGGTGTGATGGAATAAGCCAAATGGATTACCAATTGTTTAGTGATGTATTGGCTTTTGACGCTACTTACAAGAAGAACAAATATCATTGTCCACTTGTCATTTTTTCGGGTGTTAATAACCATAACCGCACAGTTGTCTTTGCAGCCGCTCTTGTGTGTGATGAGTCGGAGCAAACATATATTTGGTTGTTAAAAAGTTTGCTGGAAGCAATGAAGGGGAAGGCCCCAATTTCAGTTATCACAGATGGTGCCCTTTCAATGAAAAATGCAATCGAAAATGTTTTTCCTAATGCACATCATCGCCTATGTGCTTGGCACCTTATTCGCAATGCCACGAGTAATGTAGGTAACCCTAGGTTCACATCGCAGTTTAAGAAGTGCATGCTTGGTGATTACGAGGTTGGTGTATTCCGTAGTAAGTGGGATCGGATGGTTGAAGAGTTTGATGTGCAAGACAAGCAATGGATAATTGATATGTATGATAACCGTCATAGTTGGGCAACAGCACATATCCGTGGAAAGTTCTTTGCTGGGTTTAGGACCACTTCTCGATGTGAGGGGTTGCACTCAGTTATTGCAAAGTATGTCAAGTCCAGGTATAATTTAAGAGATTTTGTAGAGCACTTTGATAGATGTGTTGCCTACATTCGTTTCAAAGATAGTCTAGCAGACTTTGAATGTGCACATGGAGTACCTGTGATGCAAACTCATTTATTGTCATTGGAGAAGTCTGCAGCTAATTTATATACAAGAGAGGTATTTTTTCTATTTCGCCCTATTATTATAAGGTCTGGTTCAATGAAAGTGTTAGATTGCATTGATGTTGGTTCTTATATGTTATACACGGTGGTTAAGTATGGTAGTCCTAACGATACATGGCAAGTATCTTTCTGTGATTTACCAATGGAGTTTACTTGCTCCTGTATGAGGATGGAGTCATTTGGCATTCCTTGCGAACACATTCTATCTGTTTTAGTTACACTTGACATTTGTGAATTGCCAAAATGTTTAGTTCTAGATAGGTGGACCAAAAATGTGAAACAACAAATACAAGATACAAGGGGGTTCACTTGGGATTGCTTAAAGTCTACCCAATACTGGTATTTGATGGACTGGTTTAGATTGGTGGCTACACTATCAGCAGGTAAAGATGATAGGTTCAGGAGCATGAGGGATTGGGCAATAAACACAGTGGATAAAATGAAAGCTGATGATATTGCTAGTGCAGTTGCTTCTAGTAGTGCAATTCCTGCCACTCATACAGATCCTCGTGACCCCCCAATTCGTAGAAGAGCTAAGGATCGTGCCGGACAACAGTGTAGTATATGCCGGGAGCTCGGACATAACAAAACTACATGTCCAGATCGGAGTAAGTATGATAGGAGTTCACATGAACGGCATAATCTACCTACAGATGATGATGCATATGAGGCTATGTGGGATGAGGAAGAAGACTTCATTTACGAGGAAGATGAAGGTGAATGTGCGGATATGGAGATAGATGACTCTAATTATGAATTTGGAAATGAGGACGATGGAGCCAATGAAATTAATTAG 2361 0.4062 MSNEDYVDETNNVDGFNGNLENPLRNGDELLDDDIFMDANLANAEVDASEPNEGAHFDQLDESYKIDGDLGVAFDFYNAFAKSRGFSGRKSKTRKHNGIINRQNFVCCREGFRQKKADNMHTRKQEPRAETRCGCKAKVQVSFDVVSGRWIVSKFSDLHNHDLLPPIFTAMLPGHRKIPAADIEQINIMRKGGLGTAHIFAALSSQSGGHHNVPFLPRDLYNQVAQQRRRLKGDASAALQFLRKMKSIDPVMVIRYEVDRFHSIKNLFWCDGISQMDYQLFSDVLAFDATYKKNKYHCPLVIFSGVNNHNRTVVFAAALVCDESEQTYIWLLKSLLEAMKGKAPISVITDGALSMKNAIENVFPNAHHRLCAWHLIRNATSNVGNPRFTSQFKKCMLGDYEVGVFRSKWDRMVEEFDVQDKQWIIDMYDNRHSWATAHIRGKFFAGFRTTSRCEGLHSVIAKYVKSRYNLRDFVEHFDRCVAYIRFKDSLADFECAHGVPVMQTHLLSLEKSAANLYTREVFFLFRPIIIRSGSMKVLDCIDVGSYMLYTVVKYGSPNDTWQVSFCDLPMEFTCSCMRMESFGIPCEHILSVLVTLDICELPKCLVLDRWTKNVKQQIQDTRGFTWDCLKSTQYWYLMDWFRLVATLSAGKDDRFRSMRDWAINTVDKMKADDIASAVASSSAIPATHTDPRDPPIRRRAKDRAGQQCSICRELGHNKTTCPDRSKYDRSSHERHNLPTDDDAYEAMWDEEEDFIYEEDEGECADMEIDDSNYEFGNEDDGANEIN* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2818 786 MobiDBLite consensus disorder prediction 722 742 - -
Ahy19g2818 786 Pfam SWIM zinc finger 572 593 IPR007527 GO:0008270
Ahy19g2818 786 PANTHER OS02G0262500 PROTEIN 74 628 - -
Ahy19g2818 786 MobiDBLite consensus disorder prediction 680 704 - -
Ahy19g2818 786 MobiDBLite consensus disorder prediction 722 745 - -
Ahy19g2818 786 SMART 26again6 572 599 IPR006564 GO:0008270
Ahy19g2818 786 SUPERFAMILY Retrovirus zinc finger-like domains 694 728 IPR036875 GO:0003676|GO:0008270
Ahy19g2818 786 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Ahy19g2818 786 MobiDBLite consensus disorder prediction 1 24 - -
Ahy19g2818 786 MobiDBLite consensus disorder prediction 1 19 - -
Ahy19g2818 786 Pfam MULE transposase domain 284 378 IPR018289 -
Ahy19g2818 786 MobiDBLite consensus disorder prediction 767 786 - -
Ahy19g2818 786 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 628 IPR031052 GO:0006355
Ahy19g2818 786 ProSiteProfiles Zinc finger SWIM-type profile. 549 597 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2818 Ahy-Chr19 150225859 150228517 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g2818 MULE 9.30E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2818 - - adu:107465142 1561.58