Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2817 ATGGCATCTAGTCATAGTAATAATAATCATAATAGTTCACCCGTTAATAACAAAACTAAATTTGTAGTGAGTGACCTTGAGCAACAACAATTATCAAGAGACCCAGAAAATGAAGAAGAAGCAAATAAGAAGGAGGAATTTGATTACTCAAAAAGATCCCAGTGGTTGCGTGCAGCAGTGCTGGGAGCGAACGACGGGTTGGTGTCGACGGCGGCTCTGATGATGGGAGTGGGAGCAGTGAGGGAAGACATGAAGGCCATGGTGTTGTCGGGTTTCGCAGGCCTTGTGGCAGGGGCATGTAGCATGGCCATTGGTGAGTTTGTTTCTGTGTATTCACAGTTAGACATAGAGATTGCTCAAATGAAGAGACGACAACAACAAGAAGATGAGAAAGAGAAAAAGGGTTTACCGAACCCTTTGCAAGCAGCGGCAGCATCAGCTTTTGCGTTCTCGGTTGGTGCAATGGTTCCTCTTCTTGCGGCATCTTTTGTAAGGGACTATAAGCTCAGGTTGGGACTTATTTTGGGGTCAGTTAGTTTTGCTTTGATTTTGTTTGGTTGCTTGGCTGCCACTCTTGGTAAGGCTCCTCCATTTAGATCTTGTGTTAGGGTCTTCCTTGGTGGTTGGTTAGCCATGGCTATAACTTTTGGCCTAACCAAGTTGATTGGTTCAAGTGTCTTTTAG 684 0.4474 MASSHSNNNHNSSPVNNKTKFVVSDLEQQQLSRDPENEEEANKKEEFDYSKRSQWLRAAVLGANDGLVSTAALMMGVGAVREDMKAMVLSGFAGLVAGACSMAIGEFVSVYSQLDIEIAQMKRRQQQEDEKEKKGLPNPLQAAAASAFAFSVGAMVPLLAASFVRDYKLRLGLILGSVSFALILFGCLAATLGKAPPFRSCVRVFLGGWLAMAITFGLTKLIGSSVF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2817 227 MobiDBLite consensus disorder prediction 1 30 - -
Ahy19g2817 227 Pfam VIT family 129 219 IPR008217 GO:0005384|GO:0030026
Ahy19g2817 227 Pfam VIT family 56 132 IPR008217 GO:0005384|GO:0030026
Ahy19g2817 227 MobiDBLite consensus disorder prediction 1 47 - -
Ahy19g2817 227 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 15 224 - -
Ahy19g2817 227 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 15 224 IPR008217 GO:0005384|GO:0030026
Ahy19g2817 227 MobiDBLite consensus disorder prediction 31 47 - -
Ahy19g2817 227 Coils Coil 111 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2817 Ahy-Chr19 150214882 150216045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2817 28 224 Nodulin-like Gene Family AT3G43660 65.990 2.54e-93 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2817 K22736 - gmx:100814343 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2817 19 150214882 150216045 Ahy9g2779 9 116801059 116802050 hybridization
Ahy15g3651 15 159347194 159350258 Ahy19g2817 19 150214882 150216045 PCT
Ahy5g3232 5 114334991 114337519 Ahy19g2817 19 150214882 150216045 PCT
Ahy19g2817 19 150214882 150216045 Ahy15g3651 15 159347194 159350258 PCT
Ahy19g2817 19 150214882 150216045 Ahy5g3232 5 114334991 114337519 PCT