Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2814 ATGGAAGGAAATTTGTCACAGGGAGGTTTGATGCAAGGTGGGGCTTCTTTTGGTGGTTTTGATTTGCCCGGTTCGATTCGGGTTCATCACCAGGGACAGCATCCTCATACCATGCATCAACAACATCAAAATCTTCCGCGGCAAGGGTCCTCGGTTCATGAGGGTTTTCCACTTACAATGGGGAACTTACAGGGCTGTGATCAAACCATTTCGCTGACAGACTTTGGTAAGGGAGAAAGAAGCAAAAACTCGGCAAGCGAGGAAGATGAGCCGAGCTTTAATGAAGAAGGTGGTGATGGTCACCATGAAGCTGGTAGAGGGAAAAAGGGATCGCCTTGGCAGCGAGTGAAGTGGACCGATAAGATGGTAAGGCTTCTCATAACAGCTGTTTCTTACATAGGAGAGGATGGAAGTTCGGATGGCGGTGGTGGAGGAAGAAGGAGATTTGCCGTCCTACAGAAGAAAGGTAAGTGGAAGTCTGTTTCTAAGGTCATGGCCGAAAGGGGTTATCATGTTTCTCCTCAGCAGTGTGAGGATAAGTTTAATGATCTTAATAAAAGGTATAAGAAGCTTAATGATATGCTTGGAAGGGGCACTTCTTGTCAGGTTGTTGAGAATCCCACACTTTTGGATGTAATAGATTATCTTTCTGAGAAGGAAAAGGATGATGTTCGGAAAATATTAAGCTCGAAACACCTCTTCTATGAAGAGATGTGTTCTTACCATAATGGTAATAGGCTGCATTTACCCCATGATCCTGCGCTGCAGCGATCACTGCAGTTAGCACTTCGAAATAGGGATGATCATGATAATGATGATTTGAGAAAGTCCCATCATGATGATCATGACGAAGATGATCAAGATGCCGAATTCGATGATCATGATGACTTCGAAGAGAACTATACTTCCCATGGAGATAGTAGAGGAGCATATGGGTCTATGAAGAAATTGAAACAAGGACACTGCCAAGAAGATTCTACTAGTTTTGGTAACTCTTTAAATTGTCAGCACTACAGCAAAAGTTCTTATCCCCATGGACAGATGGTCCAATCCGATGTGAATCAAGGTTTACCCGAAAGCGTGCGAACAGCTTGGTTTCAGAAGCAATGGTTTGAATCTCGCTCGCTTCAGCTTGAAGAACAAAAGCTACAGATACAGGTTGAGATGTTGGAACTAGAGAAACAGAGATTAAAGTGGCAGAGGTTTAGTAAGAAGAAGGACCGGGAGTTGGAGAAACTGAGTCTGGAAAATGAAAGGATGAAGCTTGAGAACGAACGCATCGCTTTAGAACTGAAACGGAAGGAAATCGGCGCTGGCTTTAACTAG 1326 0.4389 MEGNLSQGGLMQGGASFGGFDLPGSIRVHHQGQHPHTMHQQHQNLPRQGSSVHEGFPLTMGNLQGCDQTISLTDFGKGERSKNSASEEDEPSFNEEGGDGHHEAGRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDGSSDGGGGGRRRFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPTLLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDLRKSHHDDHDEDDQDAEFDDHDDFEENYTSHGDSRGAYGSMKKLKQGHCQEDSTSFGNSLNCQHYSKSSYPHGQMVQSDVNQGLPESVRTAWFQKQWFESRSLQLEEQKLQIQVEMLELEKQRLKWQRFSKKKDRELEKLSLENERMKLENERIALELKRKEIGAGFN* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2814 441 MobiDBLite consensus disorder prediction 73 113 - -
Ahy19g2814 441 PANTHER FACTOR, PUTATIVE-RELATED 1 441 - -
Ahy19g2814 441 MobiDBLite consensus disorder prediction 80 113 - -
Ahy19g2814 441 MobiDBLite consensus disorder prediction 16 60 - -
Ahy19g2814 441 MobiDBLite consensus disorder prediction 268 284 - -
Ahy19g2814 441 Pfam Myb/SANT-like DNA-binding domain 115 241 IPR044822 -
Ahy19g2814 441 MobiDBLite consensus disorder prediction 268 312 - -
Ahy19g2814 441 Gene3D - 118 190 - -
Ahy19g2814 441 Coils Coil 373 400 - -
Ahy19g2814 441 Coils Coil 403 435 - -
Ahy19g2814 441 PANTHER F16F4.11 PROTEIN-RELATED 1 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2814 Ahy-Chr19 150181415 150184240 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy19g2814 Myb_DNA-bind_4 4.50E-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2814 - - pvu:PHAVU_007G079600g 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2814 19 150181415 150184240 Ahy19g2814 19 150181415 150184240 ECH
Ahy19g2814 19 150181415 150184240 Ahy9g2782 9 116825001 116827176 hybridization
Ahy15g3657 15 159378632 159381331 Ahy19g2814 19 150181415 150184240 PCT
Ahy5g3238 5 114366189 114368419 Ahy19g2814 19 150181415 150184240 PCT
Ahy19g2814 19 150181415 150184240 Ahy15g3657 15 159378632 159381331 PCT
Ahy19g2814 19 150181415 150184240 Ahy5g3238 5 114366189 114368419 PCT