Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2785 ATGGATCCTAATGTAGAAGAAGAGTTGCCCCAATACATACATATAAATCAGAATGAATTTTTTATACGAAGGCATAAGAAGCAGAAGGAGGAGGATATTGCTATATGTGATTGCAAATATAATGTTGACGACCCTGATAGTGCATGTGGGGACAGCTGCCTCAATGTTTTAACCAGCACCGAATGCACTCCTGGTTATTGCCCATGTGGTGACCTCTGCAAAAATCAGAGATTTCAGAAGTGTGAATATGCAAAAACAAAGTTGTTTAAAACTGAAGGCCGTGGTTGGGGTCTTTTGGCTGATGAGAACATTAAGGCGGGACAATTTGTCATTGAATACTGTGGAGAAGTAATATCATGGAAAGAAGCCAAACGTAGATCCCAGGCTTATGAAATTCAAGGTCTAACAGATGCATTTATCATTTGCCTTAATGCCTCTGAATCTATTGATGCAACAAGAAAGGGAAGTCTTGGCAGATTTATAAATCATTCCTGTCAACCAAACTGTGAGACAAGAAAATGGAATGTCTTGGGCGAAATAAGAGTTGGAATATTTGCGAAATATGATATTCCTTTTGGAGCTGAATTGGCATATGACTATAATTTTGAATGGTTTGGGGGCGCAAAGGTTCGCTGCCTCTGCGGTGCAGCTAGATGTTCTGGATTCCTTGGAGCAAAATCTCGTGGTTTCCAAGAAGATACTTATCTATGGGAAGATGATGATGACAGGTACTCTGTTGAGAAAATTCCTGTATATGACTCCGCGGAGGATGAATTGGGGACAGAAGTTCTTAAACGTATGAACTCAGACAGCTCTGGAAATGATTTTAATGGAAGAATAGGATCCTCCGTGGATAATACAATGAAAGCTGAGCAGCTACCAGACTCTGGTGCTTTCAGTATTCCCCTTAATTTGGCCCAGATGAAGGATTTAGACGTCAAGAAGATTAAAACTGAAGTAGTAAACGAGGATATGAAATTGGATTCTGAAGATACTGAACAGGCCTTCTCCCAAAAGAATGCAATGATCTCGCGTATCCGAAGTAATAGTGCTGCCAGAAACTATCACCTTGGACCTGGGTCCATGTCTAATAAACGATCCAAGGCATATCGTGGCAGAAAGTTAAAGAATCTTGTTCAGAAGAAAGTTGATGCCAAGTTTGCCGCCGGACTCTTGGCTTCAAAGGAAGCACAAGAGGAGATTCTAAAATATGAGGAAGTCAAGAATAACGCTACTTCTGGTCTCGATTCCTTATACGATGAAATAAGGCCAGCCATTGAAGAACATGAGAGGGATAGCCAAGACAGTGTATCTACCTCTGTAGCAGAGAAGTGGATTCAAGCTTGCTGCCTAAAATTGAAGGCAGAGTTTGATCTTTACTCCTCAATTGTCAAAAATGTGGCTTGCACTGCTCAAAGGTCTAAACCTCCCTCAGAAGCTGATAATGAAAACGAAATTAGGCTGTTGATGGGTTGA 1476 0.4099 MDPNVEEELPQYIHINQNEFFIRRHKKQKEEDIAICDCKYNVDDPDSACGDSCLNVLTSTECTPGYCPCGDLCKNQRFQKCEYAKTKLFKTEGRGWGLLADENIKAGQFVIEYCGEVISWKEAKRRSQAYEIQGLTDAFIICLNASESIDATRKGSLGRFINHSCQPNCETRKWNVLGEIRVGIFAKYDIPFGAELAYDYNFEWFGGAKVRCLCGAARCSGFLGAKSRGFQEDTYLWEDDDDRYSVEKIPVYDSAEDELGTEVLKRMNSDSSGNDFNGRIGSSVDNTMKAEQLPDSGAFSIPLNLAQMKDLDVKKIKTEVVNEDMKLDSEDTEQAFSQKNAMISRIRSNSAARNYHLGPGSMSNKRSKAYRGRKLKNLVQKKVDAKFAAGLLASKEAQEEILKYEEVKNNATSGLDSLYDEIRPAIEEHERDSQDSVSTSVAEKWIQACCLKLKAEFDLYSSIVKNVACTAQRSKPPSEADNENEIRLLMG* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2785 491 SMART PostSET_3 208 224 IPR003616 -
Ahy19g2785 491 ProSiteProfiles SET domain profile. 84 201 IPR001214 GO:0005515
Ahy19g2785 491 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 4 433 - -
Ahy19g2785 491 ProSiteProfiles AWS domain profile. 31 82 IPR006560 GO:0005634|GO:0018024
Ahy19g2785 491 Pfam AWS domain 43 81 IPR006560 GO:0005634|GO:0018024
Ahy19g2785 491 MobiDBLite consensus disorder prediction 471 491 - -
Ahy19g2785 491 Pfam SET domain 95 201 IPR001214 GO:0005515
Ahy19g2785 491 Gene3D SET domain 2 236 IPR046341 -
Ahy19g2785 491 PANTHER SET DOMAIN PROTEINS 4 433 - -
Ahy19g2785 491 ProSiteProfiles Post-SET domain profile. 208 224 IPR003616 -
Ahy19g2785 491 SMART shorttest3 31 83 IPR006560 GO:0005634|GO:0018024
Ahy19g2785 491 SUPERFAMILY SET domain 9 221 IPR046341 -
Ahy19g2785 491 SMART set_7 84 207 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2785 Ahy-Chr19 149568499 149573169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2785 66 223 C2H2 Transcription Factor Family AT2G23740 34.807 5.96e-21 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy19g2785 SET 9.10E-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2785 - - lang:109335575 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2785 19 149568499 149573169 Ahy19g2785 19 149568499 149573169 ECH
Ahy19g2785 19 149568499 149573169 Ahy9g2813 9 117214931 117219497 hybridization