Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2773 ATGAGCTCCAAAGATCCCCACACTGATTCACTTGATGCATTGAAGTTTAAAATGTCTGCCCGAAAGGATTCAGATAAGTTCTTCATGTCCATCAGCGAAAGAGAGAAAAAGCCATTTGATGTTTTACGTGCTTTGTACGATGGTTGCATTGCTGGAGGTGTTGCCGGAGTCATTGTAGAAACAGCTTTGTACCCCATTGATACCATCAAAACTCGATTACAGGTTGCTCGTGGTGGAGGGCAAATTATCTTGAAAGGTCTATATTCAGGGTTGGCTGGAAATCTTGCTGGTGTCTTACCAGCATCTGCGATTTTTGTTGGTGTGTATGAACCCACAAAGCAAAAATTGCTACGGTCCTTTCCTGAGAATCTCAGTGCCATAGCTCATTTTGCTGCAGGTGCTATTGCAGGAGCTGCATCTTCTCTTGTTCGTGTTCCAACTGAGGTTATTAAGCAAAGGATGCAAATGGGTCAATTTAAATCAGCACCAGCTGCTGTGCGTCTTATCGTTGCCAATGAAGGTTTTAAAGGTCTTTATGCGGGATATGGGTCTTTCTTATTGCGAGATCTACCATTCGATGCCATACAATTCTGTATCTATGAGCAGCTCCGGATCGGTTATAAGCTAGCAGCAAAAAGAGACCTAAAGGATCCAGAAAATGCTATGCTCGGGGCGTTTGCTGGTGCCATAACTGGAGCAGTAACAACACCTCTTGATGTAGTAAAAACAAGACTAATGGTTCAGGGATCACAAAACCATTACAAAGGCATTTATGATTGTGTCAACACAATAGTTAAAGAAGAAGGAACTCATGCTCTTTTTAAGGGTATGGGGCCAAGAGTGTTGTGGATAGGAATTGGTGGTTCAATATTTTTTGGTGTTCTTGAGAAGACAAAGAAAATTCTTGCTCAGAAGCATCCAAAAGCTTAG 930 0.4215 MSSKDPHTDSLDALKFKMSARKDSDKFFMSISEREKKPFDVLRALYDGCIAGGVAGVIVETALYPIDTIKTRLQVARGGGQIILKGLYSGLAGNLAGVLPASAIFVGVYEPTKQKLLRSFPENLSAIAHFAAGAIAGAASSLVRVPTEVIKQRMQMGQFKSAPAAVRLIVANEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKLAAKRDLKDPENAMLGAFAGAITGAVTTPLDVVKTRLMVQGSQNHYKGIYDCVNTIVKEEGTHALFKGMGPRVLWIGIGGSIFFGVLEKTKKILAQKHPKA* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2773 309 Pfam Mitochondrial carrier protein 48 118 IPR018108 -
Ahy19g2773 309 Pfam Mitochondrial carrier protein 219 305 IPR018108 -
Ahy19g2773 309 Pfam Mitochondrial carrier protein 124 204 IPR018108 -
Ahy19g2773 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 301 IPR018108 -
Ahy19g2773 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 206 IPR018108 -
Ahy19g2773 309 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 3 307 - -
Ahy19g2773 309 Gene3D Mitochondrial carrier domain 24 309 IPR023395 -
Ahy19g2773 309 SUPERFAMILY Mitochondrial carrier 49 296 IPR023395 -
Ahy19g2773 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 115 IPR018108 -
Ahy19g2773 309 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Ahy19g2773 309 PRINTS Mitochondrial carrier protein signature 179 197 IPR002067 GO:0055085
Ahy19g2773 309 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Ahy19g2773 309 PRINTS Mitochondrial carrier protein signature 224 246 IPR002067 GO:0055085
Ahy19g2773 309 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 3 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2773 Ahy-Chr19 149440641 149444667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2773 132 307 Chloroplast and Mitochondria Gene Families AT1G07030 32.787 1.27e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2773 K15111 - gmx:100800051 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2773 19 149440641 149444667 Ahy9g2825 9 117308466 117312361 hybridization