Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2751 ATGGGTGCTGAAGCTGGTGCAACTGAGTGTTTCAGTAAGGCCATGGCGTCGATGCCTGGGTTTCGGTTTCATCCCACGGATGAGGAGCTGGTTATGTACTATCTGAAGAGGAAGATATGTGGGAAGAAGCTGAAACTCGACGTGATTCTAGAAACCGATGTTTACAAGTGGGATCCTGAGGAATTGCCAGGGATCTCTGTACTGAGGACTGGAGATAGGCAATGGTTCTTTTTCACTCATAGAGATAGGAAGTATCCTAATGGTGCGAGGTCCAACCGAGCAACAAGGCAAGGTTACTGGAAAGCAACAGGAAAGGATCGTAATGTGACCTGCAATTCTCGGTCAGTTGGAGTGAAAAAGACTCTGGTTTTCTATAGAGGCAGAGCTCCTAATGGTGAGCGGACCGATTGGGTTATGCATGAATACACCATGGATGAAGAAGAGCTGAATAGGTGCCAGGATATTAAGGACTATTTTGCACTTTACAAGCTATACAAGAAAAGTGGACCTGGTCCTAAAAATGGAGAACAGTATGGTGCACCATTTAAAGAAGAGGAGTGGGCTGATGATGAATGTGTAGATTTCAATATTAACTCAGCAGATCGGGAGGTAGTAAATACTGTCCCTGTTAATGATCAGCTGCCTCCTTTGGCCGATGATGAAGTCACGGATATGATTAATCAAATTTTGGATAATGAGCTTGCCCTTGACCAGCAATTTGGTGACGACCTTCTTGAATTTCCTCAGGTTGTTGCTGAAGAAACACAAAGTACTGTGGTGGATCAGTTCTCTGAGGCAGTGACGGACCCCGAGTACAATGATATTTACCACTCAACCAGTCAGCACTATGATGCGCAGAATGTCAACTTCAATCAGTCGGTTGCATCTCACCTTCATGCCCCGGAAGGATCAGAAGTTATTTCTACTGCCAACATTCAAGTAGAAGACTATAACTTTCAGGAGGATGACTTCTTGGAAATCAACGATCTCAATGGTAGTGAACTTACAATTCCAAATATGGAAACACCAGTGGAGAACCTGCAGTTTGAAGATGGATTGTGTGAACTTGATCTGTTCCAAGATGCAGAGATGTTTCTTCGTGACTTGGGACCAATCAATGAGGAAACCATTCCACATTCATATATGAATAATGCCCCTGGAAGCAACATTGAAAATCAGAATTATCACTTGCTACCCAATCCAGAGGACACTACTCAAAATGTTCATGAATTTTGGATGCATGATGAAAGAAACACCCTGAGTCTGTTTGAAGGCTTTGATGATTCTGTCTCTCAACAAAATCCAGGTGCTGTATGTGACTCTGCCAGCTTTCCTACTACTGAAGGCTATGATAATCAAAGTAGCATTGCAGAAGATGTTGCTACAAGTAGATTCTCTTCGGCTCTCTGGTCCTTTGTTGAGTCAATACCTACCACTCCTGCATCAGCTGCGGAAAATGCTCTAGTGAATCGGGCTTTGAATCGAATGTCTAGCTTCAGCCGAGTGAAGATTAATATCAAGCCGACGAACACAGCTGCAGGTAAAGACACTGCAACTACGAAGAGAGTGGGCAGAAAAGGATTTTCATTCCTTTTCTTCCCAATTCTTATTGCTTTATGTGCTTTCTTATGGGTTTCTCTTGGAACTTTTAGATTATTAGGGAGATGCATCGCTCCTTGA 1680 0.4327 MGAEAGATECFSKAMASMPGFRFHPTDEELVMYYLKRKICGKKLKLDVILETDVYKWDPEELPGISVLRTGDRQWFFFTHRDRKYPNGARSNRATRQGYWKATGKDRNVTCNSRSVGVKKTLVFYRGRAPNGERTDWVMHEYTMDEEELNRCQDIKDYFALYKLYKKSGPGPKNGEQYGAPFKEEEWADDECVDFNINSADREVVNTVPVNDQLPPLADDEVTDMINQILDNELALDQQFGDDLLEFPQVVAEETQSTVVDQFSEAVTDPEYNDIYHSTSQHYDAQNVNFNQSVASHLHAPEGSEVISTANIQVEDYNFQEDDFLEINDLNGSELTIPNMETPVENLQFEDGLCELDLFQDAEMFLRDLGPINEETIPHSYMNNAPGSNIENQNYHLLPNPEDTTQNVHEFWMHDERNTLSLFEGFDDSVSQQNPGAVCDSASFPTTEGYDNQSSIAEDVATSRFSSALWSFVESIPTTPASAAENALVNRALNRMSSFSRVKINIKPTNTAAGKDTATTKRVGRKGFSFLFFPILIALCAFLWVSLGTFRLLGRCIAP* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2751 559 Gene3D NAC domain 26 169 IPR036093 GO:0003677|GO:0006355
Ahy19g2751 559 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 557 - -
Ahy19g2751 559 Pfam No apical meristem (NAM) protein 19 143 IPR003441 GO:0003677|GO:0006355
Ahy19g2751 559 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Ahy19g2751 559 PANTHER NAC TRANSCRIPTION FACTORS 2 17 557 - -
Ahy19g2751 559 SUPERFAMILY NAC domain 15 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2751 Ahy-Chr19 149054424 149058440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2751 3 557 NAC Transcription Factor Family AT1G34190 41.903 2.99e-132 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy19g2751 NAM 3.10E-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2751 - - gmx:100794925 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2751 19 149054424 149058440 Ahy9g2848 9 117567044 117571051 hybridization