Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy19g2695 | ATGACACTAACACAAATTCCTGAGAGAGCATCAATGGATATGGAATCATGTGTGCCTCCAGGATTTAGATTTCACCCAACAGAAGAAGAACTTGTGGGGTATTACCTCAAGAGGAAAATTAACTCCCTCAAAATTGATCTAGATGTTATAGTTGAGATCGATCTCTACAAAATGGAACCATGGGACATACAAGATAGATGCAAGCTAGGGTATGAAGAACAAAATGAGTGGTACTTTTTCAGCCACAAAGACAAGAAGTATCCAACAGGAACAAGAACAAACAGAGCCACTGCAGCTGGATTCTGGAAAGCAACTGGGAGAGACAAGGCTGTTATGTCGAAGAACAGGATCATTGGTATGAGGAAGACTTTGGTCTTCTACAAAGGACGTGCCCCTAATGGCCGCAAAACTGATTGGATCATGCACGAATATCGCCATCAAACCTCTGAACATGGCCCTCCTCAGGAAGAAGGATGGGTTGTATGTAGAGCATTTCGAAAACCAAGTCCAAGTCATCAAAGGCAATTAGGTTATGATCCATGGTGTAGTAATCATCATCATCAACCACATTATTTCAGAGATCAGAGTAGCTATGGTGGAAGGCCCTTATCAATCACAGATCTTCTAACTTCAGAAACTCATCATCATCATCATCTGCTGAATCACCCTACTGAAGGTACAAATTTTAGTCATCCCTTCGGTTCAGATCATCATCATCAACAAGAACAACAAGAGTTTGTAATATCAAATAATCATCAACAACTCATTGAGCTTCCACAGCTAGATAGCCCTACTAGTGCTTCTCTCTCAGCACCACCAACAACAAGTTTTGCAGTCAAAGAATCATCTTCCATTAATAATAACAATGAAGAGTATTGCAGTGATGAGAGGAACAACAACAACAATATTGATTGGAAAAGCTTGGATAACTTGTTTGCTGATACTTCTAATTACTTCTCAAATCCAAACATGTCCCAATTCATGACCATCAATCATCATCTAGGTTGTTTCCCTGGTTCATAA | 1023 | 0.3988 | MTLTQIPERASMDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFRKPSPSHQRQLGYDPWCSNHHHQPHYFRDQSSYGGRPLSITDLLTSETHHHHHLLNHPTEGTNFSHPFGSDHHHQQEQQEFVISNNHQQLIELPQLDSPTSASLSAPPTTSFAVKESSSINNNNEEYCSDERNNNNNIDWKSLDNLFADTSNYFSNPNMSQFMTINHHLGCFPGS* | 341 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy19g2695 | 340 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 30 | 16 | 323 | - | - | |
Ahy19g2695 | 340 | MobiDBLite | consensus disorder prediction | 264 | 283 | - | - | |
Ahy19g2695 | 340 | Pfam | No apical meristem (NAM) protein | 19 | 145 | IPR003441 | GO:0003677|GO:0006355 | |
Ahy19g2695 | 340 | Gene3D | NAC domain | 27 | 170 | IPR036093 | GO:0003677|GO:0006355 | |
Ahy19g2695 | 340 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 82-RELATED | 16 | 323 | - | - | |
Ahy19g2695 | 340 | ProSiteProfiles | NAC domain profile. | 18 | 167 | IPR003441 | GO:0003677|GO:0006355 | |
Ahy19g2695 | 340 | SUPERFAMILY | NAC domain | 12 | 167 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy19g2695 | Ahy-Chr19 | 148020021 | 148024717 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy19g2695 | 14 | 340 | NAC Transcription Factor Family | AT1G71930 | 54.571 | 1.12e-118 | 343 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Ahy19g2695 | NAM | 7.40E-37 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy19g2695 | - | - | gmx:100811057 | 476.863 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy19g2695 | 19 | 148020021 | 148024717 | Ahy19g2695 | 19 | 148020021 | 148024717 | ECH | |
Ahy19g2695 | 19 | 148020021 | 148024717 | Ahy9g2889 | 9 | 118111102 | 118115316 | hybridization |