Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2695 ATGACACTAACACAAATTCCTGAGAGAGCATCAATGGATATGGAATCATGTGTGCCTCCAGGATTTAGATTTCACCCAACAGAAGAAGAACTTGTGGGGTATTACCTCAAGAGGAAAATTAACTCCCTCAAAATTGATCTAGATGTTATAGTTGAGATCGATCTCTACAAAATGGAACCATGGGACATACAAGATAGATGCAAGCTAGGGTATGAAGAACAAAATGAGTGGTACTTTTTCAGCCACAAAGACAAGAAGTATCCAACAGGAACAAGAACAAACAGAGCCACTGCAGCTGGATTCTGGAAAGCAACTGGGAGAGACAAGGCTGTTATGTCGAAGAACAGGATCATTGGTATGAGGAAGACTTTGGTCTTCTACAAAGGACGTGCCCCTAATGGCCGCAAAACTGATTGGATCATGCACGAATATCGCCATCAAACCTCTGAACATGGCCCTCCTCAGGAAGAAGGATGGGTTGTATGTAGAGCATTTCGAAAACCAAGTCCAAGTCATCAAAGGCAATTAGGTTATGATCCATGGTGTAGTAATCATCATCATCAACCACATTATTTCAGAGATCAGAGTAGCTATGGTGGAAGGCCCTTATCAATCACAGATCTTCTAACTTCAGAAACTCATCATCATCATCATCTGCTGAATCACCCTACTGAAGGTACAAATTTTAGTCATCCCTTCGGTTCAGATCATCATCATCAACAAGAACAACAAGAGTTTGTAATATCAAATAATCATCAACAACTCATTGAGCTTCCACAGCTAGATAGCCCTACTAGTGCTTCTCTCTCAGCACCACCAACAACAAGTTTTGCAGTCAAAGAATCATCTTCCATTAATAATAACAATGAAGAGTATTGCAGTGATGAGAGGAACAACAACAACAATATTGATTGGAAAAGCTTGGATAACTTGTTTGCTGATACTTCTAATTACTTCTCAAATCCAAACATGTCCCAATTCATGACCATCAATCATCATCTAGGTTGTTTCCCTGGTTCATAA 1023 0.3988 MTLTQIPERASMDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFRKPSPSHQRQLGYDPWCSNHHHQPHYFRDQSSYGGRPLSITDLLTSETHHHHHLLNHPTEGTNFSHPFGSDHHHQQEQQEFVISNNHQQLIELPQLDSPTSASLSAPPTTSFAVKESSSINNNNEEYCSDERNNNNNIDWKSLDNLFADTSNYFSNPNMSQFMTINHHLGCFPGS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2695 340 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 16 323 - -
Ahy19g2695 340 MobiDBLite consensus disorder prediction 264 283 - -
Ahy19g2695 340 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
Ahy19g2695 340 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Ahy19g2695 340 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 323 - -
Ahy19g2695 340 ProSiteProfiles NAC domain profile. 18 167 IPR003441 GO:0003677|GO:0006355
Ahy19g2695 340 SUPERFAMILY NAC domain 12 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2695 Ahy-Chr19 148020021 148024717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g2695 14 340 NAC Transcription Factor Family AT1G71930 54.571 1.12e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy19g2695 NAM 7.40E-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2695 19 148020021 148024717 Ahy19g2695 19 148020021 148024717 ECH
Ahy19g2695 19 148020021 148024717 Ahy9g2889 9 118111102 118115316 hybridization