Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g2685 ATGGATACCTTCAATTTCGCATCTTTCGCACTTTCTGGTCCCTCCGGGATGCTGGGAAAACAGTTGAATTCCCCTCTACTTACTACAGATTCTGCAACACTGTTCTGCCATTACAAGGCTGATCTTTCTGCTGCTTCATCAAGTATTCCAAGTTTTCCAAAAGCAACATGGGCCTCAAATGTTTCCATGAAACATCGGATTTTACATTCAACTGCACAGATAGAAAATATAATCACTAGTGATGAAGATCAGAGTATGTGGGAAGCATCTAGACAAGCTCTTTCTGCATTTAACTTCAGCGATGAAGAGAAGGACAAGATACTTGGAAAAGCATTTGGCCTTGTTCATTCGCCTTATTGGGGAGAGGAACGTAAGACTGAAGTTCCCAAATATGAGACAGTAAATGCTGTATTAGACTACCTGAGGAGCTTAAATCTTTCTGAGGATGACATGTTCAAGTTGCTCAAAAAGTTTCCGGAGGTTCTTGGATGCAAGTTGGAGGAAGAATTGAAAGCTAATATAAAGATCCTGGACGAACAGTGGGGTATTAAAGGAAAATCTCTCAGGAACCTCCTCCTTCGAAATCCGAAGGTTTTGGGTTATAATGTTGATTGTAAAGGAGACTGCATGGCACAATGCACTAGATGCTGGGTTCGTTTCTAG 663 0.4133 MDTFNFASFALSGPSGMLGKQLNSPLLTTDSATLFCHYKADLSAASSSIPSFPKATWASNVSMKHRILHSTAQIENIITSDEDQSMWEASRQALSAFNFSDEEKDKILGKAFGLVHSPYWGEERKTEVPKYETVNAVLDYLRSLNLSEDDMFKLLKKFPEVLGCKLEEELKANIKILDEQWGIKGKSLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g2685 220 Pfam mTERF 132 202 IPR003690 GO:0003690|GO:0006355
Ahy19g2685 220 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 219 - -
Ahy19g2685 220 Gene3D Transcription termination factor 3, mitochondrial 60 216 IPR038538 -
Ahy19g2685 220 PANTHER CGI-12 PROTEIN-RELATED 16 219 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g2685 Ahy-Chr19 147872293 147874730 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy19g2685 mTERF 5.70E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g2685 - - aip:107619032 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2685 19 147872293 147874730 Ahy19g2685 19 147872293 147874730 ECH
Ahy19g2685 19 147872293 147874730 Ahy9g2895 9 118182552 118184953 hybridization